Personlig profil
Kort præsentation
Our laboratory investigates the roles of the epigenome throughout the lifespan of germ cells, using molecular cell biology and functional genomics techniques in both in vitro and in vivo mammalian systems.
Primære forskningsområder
Germ cell quality is crucial for fertility and embryonic development. Post-fertilization, the egg and sperm each contribute their epigenome to the fertilized zygote. The information transmitted from gametic epigenomes to the conceptus is crucial for proper development, as evidenced by the pathologies that arise when this information is lost or absent post-fertilization, including imprinting disorders and pregnancy loss. Gametogenesis entails rapid and extensive epigenetic reprogramming, which results in the establishment and subsequent maintenance of unique epigenetic landscapes in the oocyte and sperm. We investigate the roles of the epigenome in gametogenesis from fundamental and functional perspectives, using the mouse as our model system.
A cell’s epigenome is composed of its cell type-specific chromatin landscape and acts to preserve cell identity. In mammals, primordial germ cells experience the most extensive epigenetic reprogramming of any cell type. This reprogramming erases the chromatin landscape that defines somatic cells and prevents deleterious epimutations from being passed to the next generation. Following this erasure, the oocyte and sperm epigenomes are progressively established at later stages of oogenesis and spermatogenesis. These epigenetic changes span multiple events in gametogenesis, including PGC migration, sex specification, and meiosis, as well as distinct stages of proliferation and replicative quiescence. Using mouse genetics and molecular cell biology and next-generation sequencing methods, we aim to understand how these epigenetic dynamics influence gamete quality and function.
Samarbejde og topforskningsområder i de sidste fem år
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Germ cell chromatin†
Bakoulis, S. & Stewart-Morgan, K. R., 2026, I: Biology of Reproduction. 114, 2, s. 342–359Publikation: Bidrag til tidsskrift › Tidsskriftartikel › Forskning › peer review
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Post-replicative chromatin accessibility predicts cell fate change
Knudsen, T. E., Reverón-Gómez, N., Biran, A., Alcaraz, N., Cheloufi, S., Hochedlinger, K., Brickman, J. M., Groth, A. & Stewart-Morgan, K. R., 2026, (Accepteret/In press) I: Stem Cell Reports. 14 s., 102821.Publikation: Bidrag til tidsskrift › Tidsskriftartikel › Forskning › peer review
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Profiling Chromatin Accessibility on Replicated DNA with repli-ATAC-Seq
Stewart-Morgan, K. R. & Groth, A., 2023, Chromatin Accessibility: Methods and Protocols. Marinov, G. K. & Greenleaf, W. J. (red.). Humana Press, s. 71-84 14 s. (Methods in Molecular Biology, Bind 2611).Publikation: Bidrag til bog/antologi/rapport › Bidrag til bog/antologi › Forskning › peer review
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Quantifying propagation of DNA methylation and hydroxymethylation with iDEMS
Stewart-Morgan, K. R., Requena, C. E., Flury, V., Du, Q., Heckhausen, Z., Hajkova, P. & Groth, A., 2023, I: Nature Cell Biology. 25, s. 183-193 11 s.Publikation: Bidrag til tidsskrift › Tidsskriftartikel › Forskning › peer review
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Recycling of modified H2A-H2B provides short-term memory of chromatin states
Flury, V., Reverón-Gómez, N., Alcaraz, N., Stewart-Morgan, K. R., Wenger, A., Klose, R. J. & Groth, A., 2023, I: Cell. 186, 5, s. 1050-1065.e19 35 s.Publikation: Bidrag til tidsskrift › Tidsskriftartikel › Forskning › peer review
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Chromatin replication and epigenetic cell memory
Stewart-Morgan, K. R., Petryk, N. & Groth, A., 2020, I: Nature Cell Biology. 22, s. 361-371Publikation: Bidrag til tidsskrift › Review › peer review
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Erratum: Transcription Restart Establishes Chromatin Accessibility after DNA Replication (Molecular Cell (2019) 75(2) (284–297.e6), (S1097276519303521), (10.1016/j.molcel.2019.04.033))
Stewart-Morgan, K. R., Reverón-Gómez, N. & Groth, A., 25 jul. 2019, I: Molecular Cell. 75, 2, s. 408-414 7 s.Publikation: Bidrag til tidsskrift › Kommentar/debat › Forskning › peer review
Åben adgang22 Citationer (Scopus) -
Transcription Restart Establishes Chromatin Accessibility after DNA Replication
Stewart-Morgan, K. R., Reverón-Gómez, N. & Groth, A., 2019, I: Molecular Cell. 75, 2, s. 284-297 20 s.Publikation: Bidrag til tidsskrift › Tidsskriftartikel › Forskning › peer review
59 Citationer (Scopus)