Current status of community resources and priorities for weed genomics research

Jacob Montgomery; Sarah Morran; Dana R. MacGregor; J. Scott McElroy; Paul Neve; Célia Neto; Martin M. Vila-Aiub; Maria Victoria Sandoval; Analia I. Menéndez; Julia M. Kreiner; Longjiang Fan; Ana L. Caicedo; Peter J. Maughan; Bianca Assis Barbosa Martins; Jagoda Mika; Alberto Collavo; Aldo Merotto; Nithya K. Subramanian; Muthukumar V. Bagavathiannan; Luan Cutti; Md Mazharul Islam; Bikram S. Gill; Robert Cicchillo; Roger Gast; Neeta Soni; Terry R. Wright; Gina Zastrow-Hayes; Gregory May; Jenna M. Malone; Deepmala Sehgal; Shiv Shankhar Kaundun; Richard P. Dale; Barend Juan Vorster; Bodo Peters; Jens Lerchl; Patrick J. Tranel; Roland Beffa; Alexandre Fournier-Level; Mithila Jugulam; Kevin Fengler; Victor Llaca; Eric L. Patterson; Todd A. Gaines

doi:10.1186/s13059-024-03274-y

Current status of community resources and priorities for weed genomics research

Jacob Montgomery, Sarah Morran, Dana R. MacGregor, J. Scott McElroy, Paul Neve, Célia Neto, Martin M. Vila-Aiub, Maria Victoria Sandoval, Analia I. Menéndez, Julia M. Kreiner, Longjiang Fan, Ana L. Caicedo, Peter J. Maughan, Bianca Assis Barbosa Martins, Jagoda Mika, Alberto Collavo, Aldo Merotto, Nithya K. Subramanian, Muthukumar V. Bagavathiannan, Luan CuttiMd Mazharul Islam, Bikram S. Gill, Robert Cicchillo, Roger Gast, Neeta Soni, Terry R. Wright, Gina Zastrow-Hayes, Gregory May, Jenna M. Malone, Deepmala Sehgal, Shiv Shankhar Kaundun, Richard P. Dale, Barend Juan Vorster, Bodo Peters, Jens Lerchl, Patrick J. Tranel, Roland Beffa, Alexandre Fournier-Level, Mithila Jugulam, Kevin Fengler, Victor Llaca, Eric L. Patterson, Todd A. Gaines^*

^*Corresponding author af dette arbejde

Afgrødevidenskab

Publikation: Bidrag til tidsskrift › Review › peer review

12 Citationer (Scopus)

3 Downloads (Pure)

Abstract

Weeds are attractive models for basic and applied research due to their impacts on agricultural systems and capacity to swiftly adapt in response to anthropogenic selection pressures. Currently, a lack of genomic information precludes research to elucidate the genetic basis of rapid adaptation for important traits like herbicide resistance and stress tolerance and the effect of evolutionary mechanisms on wild populations. The International Weed Genomics Consortium is a collaborative group of scientists focused on developing genomic resources to impact research into sustainable, effective weed control methods and to provide insights about stress tolerance and adaptation to assist crop breeding.

Originalsprog	Engelsk
Artikelnummer	139
Tidsskrift	Genome Biology
Vol/bind	25
Antal sider	22
ISSN	1474-7596
DOI	https://doi.org/10.1186/s13059-024-03274-y
Status	Udgivet - 2024

Bibliografisk note

Funding Information:
The International Weed Genomics Consortium is supported by BASF SE, Bayer AG, Syngenta Ltd, Corteva Agriscience, CropLife International (Global Herbicide Resistance Action Committee), the Foundation for Food and Agriculture Research (Award DSnew-0000000024), and two conference grants from USDA-NIFA (Award numbers 2021\u201367013-33570 and 2023-67013-38785).

Publisher Copyright:
© The Author(s) 2024.

Adgang til dokumentet

10.1186/s13059-024-03274-yLicens: CC BY

Full textForlagets udgivne version, 1,47 MBLicens: CC BY

Citationsformater

Montgomery, J., Morran, S., MacGregor, D. R., McElroy, J. S., Neve, P., Neto, C., Vila-Aiub, M. M., Sandoval, M. V., Menéndez, A. I., Kreiner, J. M., Fan, L., Caicedo, A. L., Maughan, P. J., Martins, B. A. B., Mika, J., Collavo, A., Merotto, A., Subramanian, N. K., Bagavathiannan, M. V., ... Gaines, T. A. (2024). Current status of community resources and priorities for weed genomics research. Genome Biology, 25, Artikel 139. https://doi.org/10.1186/s13059-024-03274-y

Montgomery, J, Morran, S, MacGregor, DR, McElroy, JS, Neve, P , Neto, C, Vila-Aiub, MM, Sandoval, MV, Menéndez, AI, Kreiner, JM, Fan, L, Caicedo, AL, Maughan, PJ, Martins, BAB, Mika, J, Collavo, A, Merotto, A, Subramanian, NK, Bagavathiannan, MV, Cutti, L, Islam, MM, Gill, BS, Cicchillo, R, Gast, R, Soni, N, Wright, TR, Zastrow-Hayes, G, May, G, Malone, JM, Sehgal, D, Kaundun, SS, Dale, RP, Vorster, BJ, Peters, B, Lerchl, J, Tranel, PJ, Beffa, R, Fournier-Level, A, Jugulam, M, Fengler, K, Llaca, V, Patterson, EL & Gaines, TA 2024, 'Current status of community resources and priorities for weed genomics research', Genome Biology, bind 25, 139. https://doi.org/10.1186/s13059-024-03274-y

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abstract = "Weeds are attractive models for basic and applied research due to their impacts on agricultural systems and capacity to swiftly adapt in response to anthropogenic selection pressures. Currently, a lack of genomic information precludes research to elucidate the genetic basis of rapid adaptation for important traits like herbicide resistance and stress tolerance and the effect of evolutionary mechanisms on wild populations. The International Weed Genomics Consortium is a collaborative group of scientists focused on developing genomic resources to impact research into sustainable, effective weed control methods and to provide insights about stress tolerance and adaptation to assist crop breeding.",

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AU - Montgomery, Jacob

AU - Morran, Sarah

AU - MacGregor, Dana R.

AU - McElroy, J. Scott

AU - Neve, Paul

AU - Neto, Célia

AU - Vila-Aiub, Martin M.

AU - Sandoval, Maria Victoria

AU - Menéndez, Analia I.

AU - Kreiner, Julia M.

AU - Fan, Longjiang

AU - Caicedo, Ana L.

AU - Maughan, Peter J.

AU - Martins, Bianca Assis Barbosa

AU - Mika, Jagoda

AU - Collavo, Alberto

AU - Merotto, Aldo

AU - Subramanian, Nithya K.

AU - Bagavathiannan, Muthukumar V.

AU - Cutti, Luan

AU - Islam, Md Mazharul

AU - Gill, Bikram S.

AU - Cicchillo, Robert

AU - Gast, Roger

AU - Soni, Neeta

AU - Wright, Terry R.

AU - Zastrow-Hayes, Gina

AU - May, Gregory

AU - Malone, Jenna M.

AU - Sehgal, Deepmala

AU - Kaundun, Shiv Shankhar

AU - Dale, Richard P.

AU - Vorster, Barend Juan

AU - Peters, Bodo

AU - Lerchl, Jens

AU - Tranel, Patrick J.

AU - Beffa, Roland

AU - Fournier-Level, Alexandre

AU - Jugulam, Mithila

AU - Fengler, Kevin

AU - Llaca, Victor

AU - Patterson, Eric L.

AU - Gaines, Todd A.

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N2 - Weeds are attractive models for basic and applied research due to their impacts on agricultural systems and capacity to swiftly adapt in response to anthropogenic selection pressures. Currently, a lack of genomic information precludes research to elucidate the genetic basis of rapid adaptation for important traits like herbicide resistance and stress tolerance and the effect of evolutionary mechanisms on wild populations. The International Weed Genomics Consortium is a collaborative group of scientists focused on developing genomic resources to impact research into sustainable, effective weed control methods and to provide insights about stress tolerance and adaptation to assist crop breeding.

AB - Weeds are attractive models for basic and applied research due to their impacts on agricultural systems and capacity to swiftly adapt in response to anthropogenic selection pressures. Currently, a lack of genomic information precludes research to elucidate the genetic basis of rapid adaptation for important traits like herbicide resistance and stress tolerance and the effect of evolutionary mechanisms on wild populations. The International Weed Genomics Consortium is a collaborative group of scientists focused on developing genomic resources to impact research into sustainable, effective weed control methods and to provide insights about stress tolerance and adaptation to assist crop breeding.

KW - Herbicide resistance

KW - Public resources

KW - Rapid adaptation

KW - Reference genomes

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DO - 10.1186/s13059-024-03274-y

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