The FOLDALIGN web server for pairwise structural RNA alignment and mutual motif search

Jakob Hull Havgaard; Rune B. Lyngsø; Jan Gorodkin

doi:10.1093/nar/gki473

The FOLDALIGN web server for pairwise structural RNA alignment and mutual motif search

Jakob Hull Havgaard, Rune B. Lyngsø, Jan Gorodkin

Publikation: Bidrag til tidsskrift › Tidsskriftartikel › Forskning › peer review

64 Citationer (Scopus)

Abstract

Udgivelsesdato: JUL 1

Originalsprog	Engelsk
Tidsskrift	Nucleic Acids Research
Vol/bind	33
Sider (fra-til)	W650-W653
Antal sider	4
ISSN	0305-1048
DOI	https://doi.org/10.1093/nar/gki473
Status	Udgivet - 2005

Adgang til dokumentet

10.1093/nar/gki473

Citationsformater

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title = "The FOLDALIGN web server for pairwise structural RNA alignment and mutual motif search",

abstract = "FOLDALIGN is a Sankoff-based algorithm for making structural alignments of RNA sequences. Here, we present a web server for making pairwise alignments between two RNA sequences, using the recently updated version of FOLDALIGN. The server can be used to scan two sequences for a common structural RNA motif of limited size, or the entire sequences can be aligned locally or globally. The web server offers a graphical interface, which makes it simple to make alignments and manually browse the results. the web server can be accessed at http://foldalign.kvl.dk",

author = "Havgaard, {Jakob Hull} and Lyngs{\o}, {Rune B.} and Jan Gorodkin",

year = "2005",

doi = "10.1093/nar/gki473",

language = "English",

volume = "33",

pages = "W650--W653",

journal = "Nucleic Acids Research",

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TY - JOUR

T1 - The FOLDALIGN web server for pairwise structural RNA alignment and mutual motif search

AU - Havgaard, Jakob Hull

AU - Lyngsø, Rune B.

AU - Gorodkin, Jan

PY - 2005

Y1 - 2005

N2 - FOLDALIGN is a Sankoff-based algorithm for making structural alignments of RNA sequences. Here, we present a web server for making pairwise alignments between two RNA sequences, using the recently updated version of FOLDALIGN. The server can be used to scan two sequences for a common structural RNA motif of limited size, or the entire sequences can be aligned locally or globally. The web server offers a graphical interface, which makes it simple to make alignments and manually browse the results. the web server can be accessed at http://foldalign.kvl.dk

AB - FOLDALIGN is a Sankoff-based algorithm for making structural alignments of RNA sequences. Here, we present a web server for making pairwise alignments between two RNA sequences, using the recently updated version of FOLDALIGN. The server can be used to scan two sequences for a common structural RNA motif of limited size, or the entire sequences can be aligned locally or globally. The web server offers a graphical interface, which makes it simple to make alignments and manually browse the results. the web server can be accessed at http://foldalign.kvl.dk

U2 - 10.1093/nar/gki473

DO - 10.1093/nar/gki473

M3 - Journal article

C2 - 15980555

VL - 33

SP - W650-W653

JO - Nucleic Acids Research

JF - Nucleic Acids Research

SN - 0305-1048

ER -