Toppar: an interactive browser for viewing association study results

Thorhildur Juliusdottir; Karina Banasik; Neil R. Robertson; Richard Mott; Mark I. McCarthy

doi:10.1093/bioinformatics/btx840

Toppar: an interactive browser for viewing association study results

Thorhildur Juliusdottir, Karina Banasik, Neil R. Robertson, Richard Mott, Mark I. McCarthy

Publikation: Bidrag til tidsskrift › Tidsskriftartikel › Forskning › peer review

5 Citationer (Scopus)

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Abstract

Summary: Data integration and visualization help geneticists make sense of large amounts of data. To help facilitate interpretation of genetic association data we developed Toppar, a customizable visualization tool that stores results from association studies and enables browsing over multiple results, by combining features from existing tools and linking to appropriate external databases.

Availability and implementation: Detailed information on Toppar's features and functionality are on our website http://mccarthy.well.ox.ac.uk/toppar/docs along with instructions on how to download, install and run Toppar. Our online version of Toppar is accessible from the website and can be test-driven using Firefox, Safari or Chrome on sub-sets of publicly available genome-wide association study anthropometric waist and body mass index data (Locke et al., 2015; Shungin et al., 2015) from the Genetic Investigation of ANthropometric Traits consortium.

Contact: [email protected].

Originalsprog	Engelsk
Tidsskrift	Bioinformatics
Vol/bind	34
Udgave nummer	11
Sider (fra-til)	1922-1924
Antal sider	3
ISSN	1367-4803
DOI	https://doi.org/10.1093/bioinformatics/btx840
Status	Udgivet - 2018

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10.1093/bioinformatics/btx840

Toppar: an interactive browser for viewing association study resultsForlagets udgivne version, 283 KB

Citationsformater

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title = "Toppar: an interactive browser for viewing association study results",

abstract = "Summary: Data integration and visualization help geneticists make sense of large amounts of data. To help facilitate interpretation of genetic association data we developed Toppar, a customizable visualization tool that stores results from association studies and enables browsing over multiple results, by combining features from existing tools and linking to appropriate external databases.Availability and implementation: Detailed information on Toppar's features and functionality are on our website http://mccarthy.well.ox.ac.uk/toppar/docs along with instructions on how to download, install and run Toppar. Our online version of Toppar is accessible from the website and can be test-driven using Firefox, Safari or Chrome on sub-sets of publicly available genome-wide association study anthropometric waist and body mass index data (Locke et al., 2015; Shungin et al., 2015) from the Genetic Investigation of ANthropometric Traits consortium.Contact: [email protected].",

author = "Thorhildur Juliusdottir and Karina Banasik and Robertson, {Neil R.} and Richard Mott and McCarthy, {Mark I.}",

year = "2018",

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AU - Juliusdottir, Thorhildur

AU - Banasik, Karina

AU - Robertson, Neil R.

AU - Mott, Richard

AU - McCarthy, Mark I.

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AB - Summary: Data integration and visualization help geneticists make sense of large amounts of data. To help facilitate interpretation of genetic association data we developed Toppar, a customizable visualization tool that stores results from association studies and enables browsing over multiple results, by combining features from existing tools and linking to appropriate external databases.Availability and implementation: Detailed information on Toppar's features and functionality are on our website http://mccarthy.well.ox.ac.uk/toppar/docs along with instructions on how to download, install and run Toppar. Our online version of Toppar is accessible from the website and can be test-driven using Firefox, Safari or Chrome on sub-sets of publicly available genome-wide association study anthropometric waist and body mass index data (Locke et al., 2015; Shungin et al., 2015) from the Genetic Investigation of ANthropometric Traits consortium.Contact: [email protected].

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