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  • 2024

    BeetleAtlas: An Ontogenetic and Tissue-specific Transcriptomic Atlas of the Red Flour Beetle Tribolium castaneum

    Leader, D. P., Naseem, M. T. & Halberg, K. V., 2024, In: Journal of Molecular Biology. 436, 17, 8 p., 168520.

    Research output: Contribution to journalJournal articleResearchpeer-review

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    3 Citations (Scopus)
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  • Drosophila activins adapt gut size to food intake and promote regenerative growth

    Christensen, C. F., Laurichesse, Q., Loudhaief, R., Colombani, J. & Andersen, D. S., 2024, In: Nature Communications. 15, 1, 12 p., 273.

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  • Drosophila cytokine GBP2 exerts immune responses and regulates GBP1 expression through GPCR receptor Mthl10

    Ono, M., Matsumura, T., Sung, E. J., Koyama, T., Ochiai, M., Shears, S. B. & Hayakawa, Y., 2024, In: Insect Biochemistry and Molecular Biology. 167, 7 p., 104086.

    Research output: Contribution to journalJournal articleResearchpeer-review

    1 Citation (Scopus)
  • H9N2 influenza A viruses found to be enzootic in Punjab Pakistan's bird markets with evidence of human H9N2 nasal colonization

    Ali, S., Robie, E. R., Saeed, U., Jaffar, G., Bailey, E. S., Marushchak, L. V., Kreditor, B. E., Pulscher, L. A., Rubrum, A. M., Webby, R. J. & Gray, G. C., 2024, In: International Journal of Infectious Diseases. 146, 4 p., 107146.

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  • LGR signaling mediates muscle-adipose tissue crosstalk and protects against diet-induced insulin resistance

    Kubrak, O., Jørgensen, A. F., Koyama, T., Lassen, M., Nagy, S., Hald, J., Mazzoni, G., Madsen, D., Hansen, J. B., Larsen, M. R., Texada, M. J., Hansen, J. L., Halberg, K. V. & Rewitz, K., 2024, In: Nature Communications. 15, 1, 22 p., 6126.

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  • Mechanisms of Systemic Osmoregulation in Insects

    Halberg, K. V. & Denholm, B., 2024, In: Annual Review of Entomology. 69, p. 415-438 24 p.

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    11 Citations (Scopus)
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  • Protocol for genomic recombineering in Yersinia ruckeri using CRISPR Cas12a coupled with the λ Red system

    Ejaz, R. N., Taylor, N. M. I. & Steiner-Rebrova, E. M., 2024, In: STAR Protocols. 5, 2, 17 p., 103014.

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  • Something old, something new: the origins of an unusual renal cell underpinning a beetle water-conserving mechanism

    Beaven, R., Koyama, T., Naseem, M. T., Halberg, K. V. & Denholm, B., 2024, In: Development (Cambridge, England). 151, 20, 13 p., dev202994.

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  • The tick Ixodes scapularis has five different GPCRs specifically activated by ACP (adipokinetic hormone/corazonin-related peptide)

    Hauser, F., Stebegg, M., Al-Ribaty, T., Petersen, L. B., Møller, M., Drag, M. H., Sigurdsson, H. H., Vilhelm, M. J., Thygesen, G. & Grimmelikhuijzen, C. J. P., 2024, In: Biochemical and Biophysical Research Communications. 717, 7 p., 149992.

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  • Wengen's hidden powers: ROS triggers a TNFR-dependent tissue regenerative pathway in Drosophila

    Andersen, D. S. & Colombani, J., 2024, In: The EMBO Journal. 43, 17, p. 3550-3552 3 p.

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  • 2023

    A corazonin G protein-coupled receptor gene in the tick Ixodes scapularis yields two splice variants, each coding for a specific corazonin receptor

    Hauser, F., Pallesen, M., Lehnhoff, J., Li, S., Lind, A. & Grimmelikhuijzen, C. J. P., 2023, In: Biochemical and Biophysical Research Communications. 666, p. 162-169 8 p.

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    3 Citations (Scopus)
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  • Administration of vitamin E and C enhances immunological and biochemical responses against toxicity of silver nanoparticles in grass carp (Ctenopharyngodon idella)

    Iqbal, K. J., Majeed, H., Iqbal, K. J., Asghar, M., Azmat, H., Fatima, M., Khan, N., Baboo, I., Tehseen, A., Ali, W., Saeed, U., Khizar, A., Fatima, A., Nisa, S. & Davies, S. J., 2023, In: PLoS ONE. 18, 4, 21 p., e0284285.

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  • Bacillus thuringiensis toxins divert progenitor cells toward enteroendocrine fate by decreasing cell adhesion with intestinal stem cells in Drosophila

    Jneid, R., Loudhaief, R., Zucchini-Pascal, N., Nawrot-Esposito, M. P., Fichant, A., Rousset, R., Bonis, M., Osman, D. & Gallet, A., 2023, In: eLife. 12, 34 p., e80179.

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    4 Citations (Scopus)
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  • Cloning and deorphanization of three inotocin (insect oxytocin/vasopressin-like) receptors and their ligand from the tick Ixodes scapularis

    Hauser, F., Al-Ribaty, T., Stebegg, M., Thygesen, G. & Grimmelikhuijzen, C. J. P., 2023, In: Biochemical and Biophysical Research Communications. 680, p. 34-41 8 p.

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  • Compromised junctional integrity phenocopies age-dependent renal dysfunction in Drosophila Snakeskin mutants

    Dornan, A. J., Halberg, K. V., Beuter, L. K., Davies, S. A. & Dow, J. A. T., 2023, In: Journal of Cell Science. 136, 19, 15 p., jcs261118.

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  • Determination of heavy metals (Pb, Cr, As, Hg, and Cd) into the body organs of selected fish, water, sediment, and soil samples from Head Punjnad and Head Taunsa, Punjab, Pakistan

    Iqbal, K. J., Khan, N., Fatima, M., Lashari, M. H., Asad, M., Ashraf, A., Fatima, H., Majeed, H., Baboo, I., Iqbal, K. J., Asghar, M., Saeed, U., Ali, W., Nazir, S., Bano, S. & Tanveer, A., 2023, In: PLoS ONE. 18, 9, 10 p., e0288163.

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    2 Citations (Scopus)
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  • Drosophila TNF/TNFRs: At the crossroad between metabolism, immunity, and tissue homeostasis

    Colombani, J. & Andersen, D. S., 2023, In: FEBS Letters. 597, 19, p. 2416-2432 17 p.

    Research output: Contribution to journalReviewResearchpeer-review

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  • Open Access
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    2 Citations (Scopus)
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  • NHA1 is a cation/proton antiporter essential for the water-conserving functions of the rectal complex in Tribolium castaneum.

    Naseem, M. T., Beaven, R., Koyama, T., Naz, S., Su, S-Y., Leader, D. P., A Klaerke, D., Calloe, K., Denholm, B. & Halberg, K. V., 2023, In: Proceedings of the National Academy of Sciences of the United States of America. 120, 13, 11 p., e2217084120.

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    12 Citations (Scopus)
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  • The Drosophila tumor necrosis factor receptor, Wengen, couples energy expenditure with gut immunity

    Loudhaief, R., Jneid, R., Christensen, C. F., Mackay, D. J., Andersen, D. S. & Colombani, J., 2023, In: Science Advances. 9, 23, 15 p., eadd4977.

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    5 Citations (Scopus)
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  • The insect cryptonephridial complex

    Beaven, R., Halberg, K. V. & Denholm, B., 2023, In: Current Biology. 33, 14, p. R748-R749 2 p.

    Research output: Contribution to journalComment/debateResearchpeer-review

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  • 2022

    A Dilp8-dependent time window ensures tissue size adjustment in Drosophila

    Blanco-Obregon, D., Marzkioui, K. E., Brutscher, F., Kapoor, V., Valzania, L., Andersen, D. S., Colombani, J., Narasimha, S., McCusker, D., Léopold, P. & Boulan, L., 2022, In: Nature Communications. 13, 10 p., 5629.

    Research output: Contribution to journalJournal articleResearchpeer-review

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    7 Citations (Scopus)
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  • A DNA barcode survey of insect biodiversity in Pakistan

    Ashfaq, M., Khan, A. M., Rasool, A., Akhtar, S., Nazir, N., Ahmed, N., Manzoor, F., Sones, J., Perez, K., Sarwar, G., Khan, A. A., Akhter, M., Saeed, S., Sultana, R., Tahir, H. M., Rafi, M. A., Iftikhar, R., Naseem, M. T., Masood, M., Tufail, M. & 8 others, Kumar, S., Afzal, S., McKeown, J., Samejo, A. A., Khaliq, I., D'Souza, M. L., Mansoor, S. & Hebert, P. D. N., 2022, In: PeerJ. 10, 19 p., e13267.

    Research output: Contribution to journalJournal articleResearchpeer-review

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    8 Citations (Scopus)
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  • A gut-derived hormone suppresses sugar appetite and regulates food choice in Drosophila

    Malita, A., Kubrak, O., Koyama, T., Ahrentløv, N., Texada, M. J., Nagy, S., Halberg, K. V. & Rewitz, K., 2022, In: Nature Metabolism. 4, 11, p. 1532-1550 19 p.

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    21 Citations (Scopus)
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  • Canalized gene expression during development mediates caste differentiation in ants

    Qiu, B., Dai, X., Li, P., Larsen, R. S., Li, R., Price, A. L., Ding, G., Texada, M. J., Zhang, X., Zuo, D., Gao, Q., Jiang, W., Wen, T., Pontieri, L., Guo, C., Rewitz, K., Li, Q., Liu, W., Boomsma, J. J. & Zhang, G., 2022, In: Nature Ecology and Evolution. 6, 11, p. 1753-1765

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    14 Citations (Scopus)
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  • Ecdysone coordinates plastic growth with robust pattern in the developing wing

    Alves, A. N., Oliveira, M. M., Koyama, T., Shingleton, A. & Mirth, C. K., Mar 2022, In: eLife. 11, 24 p., e72666.

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    8 Citations (Scopus)
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  • Editorial: Hormones and Life History Strategies

    McMenamin, S., Shkil, F. & Koyama, T., 2022, In: Frontiers in Ecology and Evolution. 10, 3 p., 838555.

    Research output: Contribution to journalEditorialResearchpeer-review

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    2 Citations (Scopus)
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  • Insulin signaling couples growth and early maturation to cholesterol intake in Drosophila

    Texada, M. J., Lassen, M., Pedersen, L. H., Koyama, T., Malita, A. & Rewitz, K., 2022, In: Current Biology. 32, 7, p. 1548-1562.e6

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  • Reconstructing the Origins of the Somatostatin and Allatostatin-C Signaling Systems Using the Accelerated Evolution of Biodiverse Cone Snail Toxins

    Koch, T. L., Ramiro, I. B. L., Flórez Salcedo, P., Engholm, E., Jensen, K. J., Chase, K., Olivera, B. M., Bjørn-Yoshimoto, W. E., Safavi-hemami, H. & True, J. (ed.), 2022, In: Molecular Biology and Evolution. 39, 4, 20 p., msac075.

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  • Open Access
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    8 Citations (Scopus)
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  • The gut hormone Allatostatin C/Somatostatin regulates food intake and metabolic homeostasis under nutrient stress

    Kubrak, O., Koyama, T., Ahrentloev, N., Jensen, L., Malita, A., Naseem, M. T., Lassen, M., Nagy, S., Texada, M., Halberg, K. & Rewitz, K., 2022, In: Nature Communications. 13, 17 p., 692.

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  • 2021

    An evolutionary genomics view on neuropeptide genes in Hydrozoa and Endocnidozoa (Myxozoa)

    Koch, T. L., Hauser, F. & Grimmelikhuijzen, C. J. P., 2021, In: BMC Genomics. 22, 22 p., 862.

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  • A nutrient-responsive hormonal circuit mediates an inter-tissue program regulating metabolic homeostasis in adult Drosophila

    Koyama, T., Terhzaz, S., Naseem, M. T., Nagy, S., Rewitz, K., Dow, J. A. T., Davies, S. A. & Halberg, K. V., 2021, In: Nature Communications. 12, 19 p., 5178.

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    16 Citations (Scopus)
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  • A unique Malpighian tubule architecture in Tribolium castaneum informs the evolutionary origins of systemic osmoregulation in beetles

    Koyama, T., Naseem, M. T., Kolosov, D., Vo, C. T., Mahon, D., Jakobsen, A. S. S., Jensen, R. L., Denholm, B., O'Donnell, M. & Halberg, K. V., 2021, In: Proceedings of the National Academy of Sciences of the United States of America. 118, 14, 12 p., e2023314118.

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  • Co-option of immune effectors by the hormonal signalling system triggering metamorphosis in Drosophila melanogaster

    Nunes, C., Koyama, T. & Sucena, É., 2021, In: PLOS Genetics. 17, 11, 24 p., e1009916.

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  • Drosophila TNFRs Grindelwald and Wengen bind Eiger with different affinities and promote distinct cellular functions

    Palmerini, V., Monzani, S., Laurichesse, Q., Loudhaief, R., Mari, S., Cecatiello, V., Olieric, V., Pasqualato, S., Colombani, J., Andersen, D. S. & Mapelli, M., 2021, In: Nature Communications. 12, 12 p., 2070.

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  • Ecdysone quantification from whole body samples of drosophila melanogaster larvae

    Koyama, T. & Mirth, C. K., 5 Feb 2021, In: Bio-protocol. 11, 3, e3915.

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  • Endocrine regulation of immunity in insects

    Nunes, C., Sucena, É. & Koyama, T., 2021, In: FEBS Journal. 288, 13, p. 3928-3947 20 p.

    Research output: Contribution to journalReviewResearchpeer-review

    40 Citations (Scopus)
  • Guidelines for the use and interpretation of assays for monitoring autophagy (4th edition)

    Klionsky, D. J., Abdel-Aziz, A. K., Abdelfatah, S., Abdellatif, M., Abdoli, A., Abel, S., Abeliovich, H., Abildgaard, M. H., Abudu, Y. P., Acevedo-Arozena, A., Adamopoulos, I. E., Adeli, K., Adolph, T. E., Adornetto, A., Aflaki, E., Agam, G., Agarwal, A., Aggarwal, B. B., Agnello, M., Agostinis, P. & 2,908 others, Agrewala, J. N., Agrotis, A., Aguilar, P. V., Ahmad, S. T., Ahmed, Z. M., Ahumada-Castro, U., Aits, S., Aizawa, S., Akkoc, Y., Akoumianaki, T., Akpinar, H. A., Al-Abd, A. M., Al-Akra, L., Al-Gharaibeh, A., Alaoui-Jamali, M. A., Alberti, S., Alcocer-Gómez, E., Alessandri, C., Ali, M., Alim Al-Bari, M. A., Aliwaini, S., Alizadeh, J., Almacellas, E., Almasan, A., Alonso, A., Alonso, G. D., Altan-Bonnet, N., Altieri, D. C., Álvarez, É. M. C., Alves, S., Alves da Costa, C., Alzaharna, M. M., Amadio, M., Amantini, C., Amaral, C., Ambrosio, S., Amer, A. O., Ammanathan, V., An, Z., Andersen, S. U., Andrabi, S. A., Andrade-Silva, M., Andres, A. M., Angelini, S., Ann, D., Anozie, U. C., Ansari, M. Y., Antas, P., Antebi, A., Antón, Z., Anwar, T., Apetoh, L., Apostolova, N., Araki, T., Araki, Y., Arasaki, K., Araújo, W. L., Araya, J., Arden, C., Arévalo, M-A., Arguelles, S., Arias, E., Arikkath, J., Arimoto, H., Ariosa, A. R., Armstrong-James, D., Arnauné-Pelloquin, L., Aroca, A., Arroyo, D. S., Arsov, I., Artero, R., Asaro, D. M. L., Aschner, M., Ashrafizadeh, M., Ashur-Fabian, O., Atanasov, A. G., Au, A. K., Auberger, P., Auner, H. W., Aurelian, L., Autelli, R., Avagliano, L., Ávalos, Y., Aveic, S., Aveleira, C. A., Avin-Wittenberg, T., Aydin, Y., Ayton, S., Ayyadevara, S., Azzopardi, M., Baba, M., Backer, J. M., Backues, S. K., Bae, D-H., Bae, O-N., Bae, S. H., Baehrecke, E. H., Baek, A., Baek, S-H., Baek, S. H., Bagetta, G., Bagniewska-Zadworna, A., Bai, H., Bai, J., Bai, X., Bai, Y., Bairagi, N., Baksi, S., Balbi, T., Baldari, C. T., Balduini, W., Ballabio, A., Ballester, M., Balazadeh, S., Balzan, R., Bandopadhyay, R., Banerjee, S., Banerjee, S., Bánréti, Á., Bao, Y., Baptista, M. S., Baracca, A., Barbati, C., Bargiela, A., Barilà, D., Barlow, P. G., Barmada, S. J., Barreiro, E., Barreto, G. E., Bartek, J., Bartel, B., Bartolome, A., Barve, G. R., Basagoudanavar, S. H., Bassham, D. C., Bast, R. C., Basu, A., Batoko, H., Batten, I., Baulieu, E. E., Baumgarner, B. L., Bayry, J., Beale, R., Beau, I., Beaumatin, F., Bechara, L. R. G., Beck, G. R., Beers, M. F., Begun, J., Behrends, C., Behrens, G. M. N., Bei, R., Bejarano, E., Bel, S., Behl, C., Belaid, A., Belgareh-Touzé, N., Bellarosa, C., Belleudi, F., Belló Pérez, M., Bello-Morales, R., Beltran, J. S. D. O., Beltran, S., Benbrook, D. M., Bendorius, M., Benitez, B. A., Benito-Cuesta, I., Bensalem, J., Berchtold, M. W., Berezowska, S., Bergamaschi, D., Bergami, M., Bergmann, A., Berliocchi, L., Berlioz-Torrent, C., Bernard, A., Berthoux, L., Besirli, C. G., Besteiro, S., Betin, V. M., Beyaert, R., Bezbradica, J. S., Bhaskar, K., Bhatia-Kissova, I., Bhattacharya, R., Bhattacharya, S., Bhattacharyya, S., Bhuiyan, M. S., Bhutia, S. K., Bi, L., Bi, X., Biden, T. J., Bijian, K., Billes, V. A., Binart, N., Bincoletto, C., Birgisdottir, A. B., Bjorkoy, G., Blanco, G., Blas-Garcia, A., Blasiak, J., Blomgran, R., Blomgren, K., Blum, J. S., Boada-Romero, E., Boban, M., Boesze-Battaglia, K., Boeuf, P., Boland, B., Bomont, P., Bonaldo, P., Bonam, S. R., Bonfili, L., Bonifacino, J. S., Boone, B. A., Bootman, M. D., Bordi, M., Borner, C., Bornhauser, B. C., Borthakur, G., Bosch, J., Bose, S., Botana, L. M., Botas, J., Boulanger, C. M., Boulton, M. E., Bourdenx, M., Bourgeois, B., Bourke, N. M., Bousquet, G., Boya, P., Bozhkov, P. V., Bozi, L. H. M., Bozkurt, T. O., Brackney, D. E., Brandts, C. H., Braun, R. J., Braus, G. H., Bravo-Sagua, R., Bravo-San Pedro, J. M., Brest, P., Bringer, M-A., Briones-Herrera, A., Broaddus, V. C., Brodersen, P., Brodsky, J. L., Brody, S. L., Bronson, P. G., Bronstein, J. M., Brown, C. N., Brown, R. E., Brum, P. C., Brumell, J. H., Brunetti-Pierri, N., Bruno, D., Bryson-Richardson, R. J., Bucci, C., Buchrieser, C., Bueno, M., Buitrago-Molina, L. E., Buraschi, S., Buch, S., Buchan, J. R., Buckingham, E. M., Budak, H., Budini, M., Bultynck, G., Burada, F., Burgoyne, J. R., Burón, M. I., Bustos, V., Büttner, S., Butturini, E., Byrd, A., Cabas, I., Cabrera-Benitez, S., Cadwell, K., Cai, J., Cai, L., Cai, Q., Cairó, M., Calbet, J. A., Caldwell, G. A., Caldwell, K. A., Call, J. A., Calvani, R., Calvo, A. C., Calvo-Rubio Barrera, M., Camara, N. O. S., Camonis, J. H., Camougrand, N., Campanella, M., Campbell, E. M., Campbell-Valois, F-X., Campello, S., Campesi, I., Campos, J. C., Camuzard, O., Cancino, J., Candido de Almeida, D., Canesi, L., Caniggia, I., Canonico, B., Cantí, C., Cao, B., Caraglia, M., Caramés, B., Carchman, E. H., Cardenal-Muñoz, E., Cardenas, C., Cardenas, L., Cardoso, S. M., Carew, J. S., Carle, G. F., Carleton, G., Carloni, S., Carmona-Gutierrez, D., Carneiro, L. A., Carnevali, O., Carosi, J. M., Carra, S., Carrier, A., Carrier, L., Carroll, B., Carter, A. B., Carvalho, A. N., Casanova, M., Casas, C., Casas, J., Cassioli, C., Castillo, E. F., Castillo, K., Castillo-Lluva, S., Castoldi, F., Castori, M., Castro, A. F., Castro-Caldas, M., Castro-Hernandez, J., Castro-Obregon, S., Catz, S. D., Cavadas, C., Cavaliere, F., Cavallini, G., Cavinato, M., Cayuela, M. L., Cebollada Rica, P., Cecarini, V., Cecconi, F., Cechowska-Pasko, M., Cenci, S., Ceperuelo-Mallafré, V., Cerqueira, J. J., Cerutti, J. M., Cervia, D., Cetintas, V. B., Cetrullo, S., Chae, H-J., Chagin, A. S., Chai, C-Y., Chakrabarti, G., Chakrabarti, O., Chakraborty, T., Chakraborty, T., Chami, M., Chamilos, G., Chan, D. W., Chan, E. Y. W., Chan, E. D., Chan, H. Y. E., Chan, H. H., Chan, H., Chan, M. T. V., Chan, Y. S., Chandra, P. 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    Nielsen, S. K. D., Koch, T. L., Wiisbye, S. H., Grimmelikhuijzen, C. J. P. & Garm, A., 2021, In: Journal of Comparative Neurology. 529, 11, p. 2865-2882 18 p.

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    Daimon, T., Koyama, T., Yamamoto, G., Sezutsu, H., Mirth, C. K. & Shinoda, T., 2021, In: Current Biology. 31, 4, p. 884-891.e3 11 p.

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  • 2020

    A comparative genomics study of neuropeptide genes in the cnidarian subclasses Hexacorallia and Ceriantharia

    Koch, T. L. & Grimmelikhuijzen, C. J. P., 2020, In: BMC Genomics. 21, 21 p., 666.

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    Maurer, G. W., Malita, A., Nagy, S., Koyama, T., Werge, T. M., Halberg, K. A., Texada, M. J. & Rewitz, K., 2020, In: PLOS Genetics. 16, 4, 31 p., e1008727.

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    Xu, L. C., Nunes, C., Wang, V. R., Saito, A., Chen, T., Basak, P., Chang, J. J., Koyama, T. & Suzuki, Y., 2020, In: Insect Biochemistry and Molecular Biology. 119, 13 p., 103335.

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  • Mechanism of threshold size assessment: Metamorphosis is triggered by the TGF-beta/Activin ligand Myoglianin

    He, L. L., Shin, S. H., Wang, Z., Yuan, I., Weschler, R., Chiou, A., Koyama, T., Nijhout, H. F. & Suzuki, Y., 2020, In: Insect Biochemistry and Molecular Biology. 126, 12 p., 103452.

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