Personal profile
Primary fields of research
My main research area is within plant-microbe interactions with focus on pathogen effector genomics and biology and we are mostly using barley and the barley powdery mildew fungus, Blumeria hordei, as pathosystem but we also employ Arabidopsis and its compatible powdery mildew fungi and I have also worked on the stripe rust pathogen, Puccinia striiformis.
We are studying defence signalling using various Arabidopsis mutants and have identified new signalling components using the lesion mimic mutant lacking the two syntaxins pen1 and syp122.
I have been involved in characterization of the Danish apple collection using SNP-markers and performed genome wide association studies based on this population for traits related to fruit volatiles, sugars and harvest date and characterization of certain candidate genes is ongoing.
During the years I have been involved in research on wild Crocus-species and lately also indoor cultivation of Crocus sativus under various light spectra conditions.
Teaching
Teaching in courses:
Genetics (course responsible), Plantevidenskab (course responsible), Molecular Genetics, From Genomics to Plant Breeding, Fruit and Berry Crop Physiology and Quality, and Advanced Plant Ecophysiology.
Supervision:
I have supervised 13 PhD-students and 14 master students as main or co-supervisor. I have also supervised many short- and long term visitors in the lab.
Education/Academic qualification
PhD, Technical University of Denmark
1991 → 1995
Agronom, Royal Veterinary and Agricultural University
1983 → 1990
External positions
Risø National Laboratory
1 Jan 1997 → 31 Dec 2004
PostDoc, University of Adelaide
1 Nov 1995 → 30 Nov 1996
PostDoc, Universität Hamburg
1 May 1995 → 31 Oct 1995
Collaborations and top research areas from the last five years
Research output
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Barley powdery mildew effector CSEP0162 interacts with the endosome membrane-binding domain of barley MON1
Deb, S., Ar, E., Liao, W., Nielsen, M. E., Xie, W., Pedersen, C. & Thordal-Christensen, H., 2025, In: Journal of Experimental Botany. 76, 20, p. 5771-5774 eraf343.Research output: Contribution to journal › Comment/debate › Research › peer-review
Open AccessFile3 Downloads (Pure) -
Cultivar fingerprinting and SNP-based pedigree reconstruction in Danish heritage apple cultivars utilizing genotypic data from multiple germplasm collections in the world
Larsen, B., Howard, N. P., Denancé, C., Durel, C. E., Pedersen, C., Sätra, J. S. A., Garkava-Gustavsson, L., Troggio, M. & van de Weg, E., 2025, In: Genetic Resources and Crop Evolution. 72, p. 2397-2411Research output: Contribution to journal › Journal article › Research › peer-review
Open AccessFile2 Citations (Scopus)30 Downloads (Pure) -
Light spectrum modulation of corm development and starch biosynthesis in saffron (Crocus sativus L.): insights into CsSUS1, CsPhol, and SBE gene expression
Moradi, S., Moosavi-Nezhad, M., Salami, S. A., Pedersen, C., Gruda, N. S., Aliniaeifard, S. & Kafi, M., 2025, In: Horticulture Environment and Biotechnology. 66, p. 1591–1607Research output: Contribution to journal › Journal article › Research › peer-review
Open AccessFile1 Downloads (Pure) -
Powdery mildew effectors AVRA1 and BEC1016 target the ER J-domain protein HvERdj3B required for immunity in barley
Li, Z., Velásquez-Zapata, V., Elmore, J. M., Li, X., Xie, W., Deb, S., Tian, X., Banerjee, S., Jørgensen, H. J. L., Pedersen, C., Wise, R. P. & Thordal-Christensen, H., 2024, In: Molecular Plant Pathology. 25, 5, 18 p., e13463.Research output: Contribution to journal › Journal article › Research › peer-review
Open AccessFile10 Citations (Scopus)57 Downloads (Pure) -
Barley endosomal MONENSIN SENSITIVITY1 is a target of the powdery mildew effector CSEP0162 and plays a role in plant immunity
Liao, W., Nielsen, M. E., Pedersen, C., Xie, W. & Thordal-Christensen, H., 2023, In: Journal of Experimental Botany. 74, 1, p. 118-129Research output: Contribution to journal › Journal article › Research › peer-review
Open AccessFile17 Citations (Scopus)82 Downloads (Pure) -
In planta testing of Bacillus spore suspensions identifies potential candidates for biosolutions against Septoria tritici blotch in wheat
Khanam, S., Rojas, E., Pedersen, C., Gottardi, M., Iversen, A., Oxholm, L. & Jørgensen, H. J. L., 2023. 1 p.Research output: Contribution to conference › Conference abstract for conference › Research
Open AccessFile54 Downloads (Pure) -
Monochromatic blue light enhances crocin and picrocrocin content by upregulating the expression of underlying biosynthetic pathway genes in saffron (Crocus sativus L.)
Moradi, S., Kafi, M., Aliniaeifard, S., Moosavi-Nezhad, M., Pedersen, C., Gruda, N. S. & Salami, S. A., 2022, In: Frontiers in Horticulture. 1, 13 p.Research output: Contribution to journal › Journal article › Research › peer-review
Open AccessFile22 Citations (Scopus)21 Downloads (Pure) -
Powdery mildew effectors AVRA1 and BEC1016 target the ER J-domain protein HvERdj3B required for immunity in barley
Li, Z., Velásquez-Zapata, V., Elmore, J. M., Li, X., Xie, W., Banerjee, S., Jørgensen, H. J. L., Pedersen, C., Wise, R. P. & Thordal-Christensen, H., 2022, Cold Spring Harbor Laboratory, 35 p. (bioRxiv).Research output: Working paper › Preprint
File59 Downloads (Pure)