Charleen Gaunitz

Search results

• 2024

  Elevated genetic risk for multiple sclerosis emerged in steppe pastoralist populations

  Barrie, W., Yang, Y., Irving-Pease, E. K., Attfield, K. E., Scorrano, G., Jensen, L. T., Armen, A. P., Dimopoulos, E. A., Stern, A., Refoyo-Martinez, A., Pearson, A., Ramsøe, A., Gaunitz, C., Demeter, F., Jørkov, M. L. S., Møller, S. B., Springborg, B., Klassen, L., Hyldgård, I. M., Wickmann, N. & 11 others, Vinner, L., Korneliussen, T. S., Allentoft, M. E., Sikora, M., Kristiansen, K., Rodriguez, S., Nielsen, R., Iversen, A. K. N., Lawson, D. J., Fugger, L. & Willerslev, E., 2024, In: Nature. 625, 7994, p. 321-328

  Research output: Contribution to journal › Journal article › Research › peer-review

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  34 Citations (Scopus)

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• Population genomics of post-glacial western Eurasia

  Allentoft, M. E., Sikora, M., Refoyo-Martínez, A., Irving-Pease, E. K., Fischer, A., Barrie, W., Ingason, A., Stenderup, J., Sjögren, K-G., Pearson, A., da Mota, B. S., Paulsson, B. S., Halgren, A., Macleod, R., Jørkov, M. L. S., Demeter, F., Sørensen, L., Nielsen, P. O., Henriksen, R. A., Vimala, T. & 144 others, McColl, H., Margaryan, A., Ilardo, M., Vaughn, A., Mortensen, M. F., Nielsen, A. B., Hede, M. U., Johannsen, N. N., Rasmussen, P., Vinner, L., Renaud, G., Stern, A., Jensen, T. Z. T., Scorrano, G., Schroeder, H., Lysdahl, P., Ramsøe, A. D., Skorobogatov, A., Schork, A. J., Rosengren, A., Ruter, A., Outram, A., Timoshenko, A. A., Buzhilova, A., Coppa, A., Zubova, A., Silva, A. M., Hansen, A. J., Gromov, A., Logvin, A., Gotfredsen, A. B., Nielsen, B. H., González-Rabanal, B., Lalueza-Fox, C., McKenzie, C. J., Gaunitz, C., Blasco, C., Liesau, C., Martinez-Labarga, C., Pozdnyakov, D. V., Cuenca-Solana, D., Lordkipanidze, D. O., En’shin, D., Salazar-García, D. C., Price, T. D., Borić, D., Kostyleva, E., Veselovskaya, E. V., Usmanova, E. R., Cappellini, E., Petersen, E. B., Kannegaard, E., Radina, F., Yediay, F. E., Duday, H., Gutiérrez-Zugasti, I., Merts, I., Potekhina, I., Shevnina, I., Altinkaya, I., Guilaine, J., Hansen, J., Tortosa, J. E. A., Zilhão, J., Vega, J., Pedersen, K. B., Tunia, K., Zhao, L., Mylnikova, L. N., Larsson, L., Metz, L., Yepiskoposyan, L., Pedersen, L., Sarti, L., Orlando, L., Slimak, L., Klassen, L., Blank, M., González-Morales, M., Silvestrini, M., Vretemark, M., Nesterova, M. S., Rykun, M., Rolfo, M. F., Szmyt, M., Przybyła, M., Calattini, M., Sablin, M., Dobisíková, M., Meldgaard, M., Johansen, M., Berezina, N., Card, N., Saveliev, N. A., Poshekhonova, O., Rickards, O., Lozovskaya, O. V., Gábor, O., Uldum, O. C., Aurino, P., Kosintsev, P., Courtaud, P., Ríos, P., Mortensen, P., Lotz, P., Persson, P., Bangsgaard, P., de Barros Damgaard, P., Vang Petersen, P., Martinez, P. P., Włodarczak, P., Smolyaninov, R. V., Maring, R., Menduiña, R., Badalyan, R., Iversen, R., Turin, R., Vasilyev, S., Wåhlin, S., Borutskaya, S., Skochina, S., Sørensen, S. A., Andersen, S. H., Jørgensen, T., Serikov, Y. B., Molodin, V. I., Smrcka, V., Merts, V., Appadurai, V., Moiseyev, V., Magnusson, Y., Kjær, K. H., Lynnerup, N., Lawson, D. J., Sudmant, P. H., Rasmussen, S., Korneliussen, T. S., Durbin, R., Nielsen, R., Delaneau, O., Werge, T., Racimo, F., Kristiansen, K. & Willerslev, E., 2024, In: Nature. 625, 7994, p. 301-311

  Research output: Contribution to journal › Journal article › Research › peer-review

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  31 Citations (Scopus)

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• Repeated plague infections across six generations of Neolithic Farmers

  Seersholm, F. V., Sjögren, K-G., Koelman, J., Blank, M., Svensson, E. M., Staring, J., Fraser, M., Pinotti, T., McColl, H., Gaunitz, C., Ruiz-Bedoya, T., Granehäll, L., Villegas-Ramirez, B., Fischer, A., Price, T. D., Allentoft, M. E., Iversen, A. K. N., Axelsson, T., Ahlström, T., Götherström, A. & 6 others, Storå, J., Kristiansen, K., Willerslev, E., Jakobsson, M., Malmström, H. & Sikora, M., 2024, In: Nature. 632, 8023, p. 114-121

  Research output: Contribution to journal › Journal article › Research › peer-review

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• Widespread horse-based mobility arose around 2200 bce in Eurasia

  Librado, P., Tressières, G., Chauvey, L., Fages, A., Khan, N., Schiavinato, S., Calvière-Tonasso, L., Kusliy, M. A., Gaunitz, C., Liu, X., Wagner, S., Der Sarkissian, C., Seguin-Orlando, A., Perdereau, A., Aury, J-M., Southon, J., Shapiro, B., Bouchez, O., Donnadieu, C., Collin, Y. R. H. & 121 others, Gregersen, K. M., Jessen, M. D., Christensen, K., Claudi-Hansen, L., Pruvost, M., Pucher, E., Vulic, H., Novak, M., Rimpf, A., Turk, P., Reiter, S., Brem, G., Schwall, C., Barrey, É., Robert, C., Degueurce, C., Horwitz, L. K., Klassen, L., Rasmussen, U., Kveiborg, J., Johannsen, N. N., Makowiecki, D., Makarowicz, P., Szeliga, M., Ilchyshyn, V., Rud, V., Romaniszyn, J., Mullin, V. E., Verdugo, M., Bradley, D. G., Cardoso, J. L., Valente, M. J., Telles Antunes, M., Ameen, C., Thomas, R., Ludwig, A., Marzullo, M., Prato, O., Bagnasco Gianni, G., Tecchiati, U., Granado, J., Schlumbaum, A., Deschler-Erb, S., Mráz, M. S., Boulbes, N., Gardeisen, A., Mayer, C., Döhle, H-J., Vicze, M., Kosintsev, P. A., Kyselý, R., Peške, L., O’Connor, T., Ananyevskaya, E., Shevnina, I., Logvin, A., Kovalev, A. A., Iderkhangai, T-O., Sablin, M. V., Dashkovskiy, P. K., Graphodatsky, A. S., Merts, I., Merts, V., Kasparov, A. K., Pitulko, V. V., Onar, V., Öztan, A., Arbuckle, B. S., McColl, H., Renaud, G., Khaskhanov, R., Demidenko, S., Kadieva, A., Atabiev, B., Sundqvist, M., Lindgren, G., López-Cachero, F. J., Albizuri, S., Trbojević Vukičević, T., Rapan Papeša, A., Burić, M., Šikanjić, P. R., Weinstock, J., Asensio Vilaró, D., Codina, F., García Dalmau, C., de Llorens, J. M., Pou, J., de Prado, G., Sanmartí, J., Kallala, N., Torres, J. R., Maraoui-Telmini, B., Franco, M-C. B., Valenzuela-Lamas, S., Zazzo, A., Lepetz, S., Duchesne, S., Alexeev, A., Bayarsaikhan, J., Houle, J-L., Bayarkhuu, N., Turbat, T., Crubézy, É., Shingiray, I., Mashkour, M., Berezina, N. Y., Korobov, D. S., Belinskiy, A., Kalmykov, A., Demoule, J-P., Reinhold, S., Hansen, S., Wallner, B., Roslyakova, N., Kuznetsov, P. F., Tishkin, A. A., Wincker, P., Kanne, K., Outram, A. & Orlando, L., 2024, In: Nature. 631, 8022, p. 819-825 7 p.

  Research output: Contribution to journal › Journal article › Research › peer-review

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  8 Citations (Scopus)

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• 2022

  A Middle Pleistocene Denisovan molar from the Annamite Chain of northern Laos

  Demeter, F., Zanolli, C., Westaway, K. E., Joannes-Boyau, R., Duringer, P., Morley, M. W., Welker, F., Rüther, P. L., Skinner, M. M., McColl, H., Gaunitz, C., Vinner, L., Dunn, T. E., Olsen, J. V., Sikora, M., Ponche, J-L., Suzzoni, E., Frangeul, S., Boesch, Q., Antoine, P-O. & 20 others, Pan, L., Xing, S., Zhao, J-X., Bailey, R. M., Boualaphane, S., Sichanthongtip, P., Sihanam, D., Patole-Edoumba, E., Aubaile, F., Crozier, F., Bourgon, N., Zachwieja, A., Luangkhoth, T., Souksavatdy, V., Sayavongkhamdy, T., Cappellini, E., Bacon, A-M., Hublin, J-J., Willerslev, E. & Shackelford, L., 2022, In: Nature Communications. 13, 17 p., 2557.

  Research output: Contribution to journal › Journal article › Research › peer-review

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  33 Citations (Scopus)

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• Genetic risk for Multiple Sclerosis originated in Pastoralist Steppe populations

  Barrie, W., Yang, Y., Attfield, K. E., Irving-Pease, E., Scorrano, G., Jensen, L. T., Armen, A. P., Dimopoulos, E. A., Stern, A., Refoyo-Martínez, A., Ramsøe, A., Gaunitz, C., Demeter, F., Jørkov, M. L. S., Møller, S. B., Springborg, B., Klassen, L., Hyldgård, I. M., Wickmann, N., Vinner, L. & 9 others, Korneliussen, T. S., Sikora, M., Kristiansen, K., Rodriguez, S., Nielsen, R., Iversen, A. K. N., Lawson, D. J., Fugger, L. & Willerslev, E., 2022, bioRxiv, 55 p.

  Research output: Working paper › Preprint

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  58 Downloads (Pure)

• Population Genomics of Stone Age Eurasia

  Allentoft, M. E., Sikora, M., Refoyo-Martínez, A., Irving-Pease, E. K., Fischer, A., Barrie, W., Ingason, A., Stenderup, J., Sjögren, K-G., Pearson, A., Mota, B., Paulsson, B. S., Halgren, A., Macleod, R., Schjellerup Jørkov, M. L., Demeter, F., Novosolov, M., Sørensen, L., Nielsen, P-O., Henriksen, R. H. A. & 143 others, Vimala, T., McColl, H., Margaryan, A., Ilardo, M., Vaughn, A., Mortensen, M. F., Nielsen, A. B., Hede, M. U., Rasmussen, P., Vinner, L., Renaud, G., Stern, A., Trolle Jensen, T. Z., Johannsen, N. N., Scorrano, G., Schroeder, H., Lysdahl, P., Ramsøe, A. D., Skorobogatov, A., Schork, A. J., Rosengren, A., Ruter, A., Outram, A., Timoshenko, A. A., Buzhilova, A., Coppa, A., Zubova, A., Silva, A. M., Hansen, A. J., Gromov, A., Logvin, A., Gotfredsen, A. B., Nielsen, B. H., González-Rabanal, B., Lalueza-Fox, C., McKenzie, C. J., Gaunitz, C., Blasco, C., Liesau, C., Martinez-Labarga, C., Pozdnyakov, D. V., Cuenca-Solana, D., Lordkipanidze, D. O., En’shin, D., Salazar-García, D. C., Price, T. D., Borić, D., Kostyleva, E., Veselovskaya, E. V., Usmanova, E. R., Cappellini, E., Petersen, E. B., Kannegaard, E., Radina, F., Yediay, F. E., Duday, H., Gutiérrez-Zugasti, I., Potekhina, I., Shevnina, I., Altinkaya, I., Guilaine, J., Hansen, J., Tortosa, J. E. A., Zilhão, J., Vega, J., Pedersen, K. B., Tunia, K., Zhao, L., Mylnikova, L. N., Larsson, L., Metz, L., Yeppiskoposyan, L., Pedersen, L., Sarti, L., Orlando, L., Slimak, L., Klassen, L., Blank, M., González-Morales, M., Silvestrini, M., Vretemark, M., Nesterova, M. S., Rykun, M., Rolfo, M. F., Szmyt, M., Przybyła, M., Calattini, M., Sablin, M., Dobisíková, M., Meldgaard, M., Johansen, M., Berezina, N., Card, N., Saveliev, N. A., Poshekhonova, O., Rickards, O., Lozovskaya, O. V., Uldum, O. C., Aurino, P., Kosintsev, P., Courtaud, P., Ríos, P., Mortensen, P., Lotz, P., Persson, P. Å., Bangsgaard, P., Damgaard, P. D. B., Petersen, P. V., Martinez, P. P., Włodarczak, P., Smolyaninov, R. V., Maring, R., Menduiña, R., Badalyan, R., Iversen, R., Turin, R., Vasilyiev, S., Wåhlin, S., Borutskaya, S., Skochina, S., Sørensen, S. A., Andersen, S. H., Jørgensen, T., Serikov, Y. B., Molodin, V. I., Smrcka, V., Merz, V., Appadurai, V., Moiseyev, V., Magnusson, Y., Kjær, K. H., Lynnerup, N., Lawson, D. J., Sudmant, P. H., Rasmussen, S., Korneliussen, T., Durbin, R., Nielsen, R., Delaneau, O., Werge, T., Racimo, F., Kristiansen, K. & Willerslev, E., 2022, p. 1-71, (bioRxiv).

  Research output: Working paper › Preprint

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• 2020

  The mules that are not mules-metrics, morphology, archaeogenomics and mtDNA d-loop diversity in equids from Roman Switzerland

  Granado, J. D., Dill, N., Gaunitz, C., Fages, A., Khan, N., Mraz, M. S., Deschler-Erb, S., Orlando, L. & Schlumbaum, A., 2020, In: Journal of Archaeological Science. 123, 9 p., 105253.

  Research output: Contribution to journal › Journal article › Research › peer-review

  Open Access

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  8 Citations (Scopus)

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• 2019

  Reconstructing the History of Biological Changes Underlying Extinction and Domestication Processes: A Tale from Ancient Horse Genomics

  Gaunitz, C., 2019, Natural History Museum of Denmark, Faculty of Science, University of Copenhagen.

  Research output: Book/Report › Ph.D. thesis › Research

• Tracking Five Millennia of Horse Management with Extensive Ancient Genome Time Series

  Fages, A., Hanghøj, K., Khan, N., Gaunitz, C., Seguin-Orlando, A., Leonardi, M., McCrory Constantz, C., Gamba, C., Al-Rasheid, K. A. S., Albizuri, S., Alfarhan, A. H., Allentoft, M., Alquraishi, S., Anthony, D., Baimukhanov, N., Barrett, J. H., Bayarsaikhan, J., Benecke, N., Bernáldez-Sánchez, E., Berrocal-Rangel, L. & 101 others, Biglari, F., Boessenkool, S., Boldgiv, B., Brem, G., Brown, D., Burger, J., Crubézy, E., Daugnora, L., Davoudi, H., Damgaard, P. D. B., de los Ángeles de Chorro y de Villa-Ceballos, M., Deschler-Erb, S., Detry, C., Dill, N., do Mar Oom, M., Dohr, A., Ellingvåg, S., Erdenebaatar, D., Fathi, H., Felkel, S., Fernández-Rodríguez, C., García-Viñas, E., Germonpré, M., Granado, J. D., Hallsson, J. H., Hemmer, H., Hofreiter, M., Kasparov, A., Khasanov, M., Khazaeli, R., Kosintsev, P., Kristiansen, K., Kubatbek, T., Kuderna, L., Kuznetsov, P., Laleh, H., Leonard, J. A., Lhuillier, J., Liesau von Lettow-Vorbeck, C., Logvin, A., Lõugas, L., Ludwig, A., Luis, C., Arruda, A. M., Marques-Bonet, T., Matoso Silva, R., Merz, V., Mijiddorj, E., Miller, B. K., Monchalov, O., Mohaseb, F. A., Morales, A., Nieto-Espinet, A., Nistelberger, H., Onar, V., Pálsdóttir, A. H., Pitulko, V., Pitskhelauri, K., Pruvost, M., Rajic Sikanjic, P., Rapan Papeša, A., Roslyakova, N., Sardari, A., Sauer, E., Schafberg, R., Scheu, A., Schibler, J., Schlumbaum, A., Serrand, N., Serres-Armero, A., Shapiro, B., Sheikhi Seno, S., Shevnina, I., Shidrang, S., Southon, J., Star, B., Sykes, N., Taheri, K., Taylor, W., Teegen, W. R., Trbojević Vukičević, T., Trixl, S., Tumen, D., Undrakhbold, S., Usmanova, E., Vahdati, A., Valenzuela-Lamas, S., Viegas, C., Wallner, B., Weinstock, J., Zaibert, V., Clavel, B., Lepetz, S., Mashkour, M., Helgason, A., Stefánsson, K., Barrey, E., Willerslev, E., Outram, A. K., Librado, P. & Orlando, L., 2019, In: Cell. 177, 6, p. 1419-1435, e1-e31

  Research output: Contribution to journal › Journal article › Research › peer-review

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  185 Citations (Scopus)

  181 Downloads (Pure)
• 2018

  Ancient genomes revisit the ancestry of domestic and Przewalski's horses

  Gaunitz, C., Fages, A. A., Hanghøj, K. E., Albrechtsen, A., Khan, N., Schubert, M., Seguin-Orlando, A., Owens, I. J., Felkel, S., Bignon-Lau, O., Damgaard, P. D. B., Mittnik, A., Mohaseb, A. F., Davoudi, H., Alquraishi, S., Alfarhan, A. H., Al-Rasheid, K. A. S., Crubézy, E., Benecke, N., Olsen, S. & 27 others, Brown, D., Anthony, D., Massy, K., Pitulko, V., Kasparov, A., Brem, G., Hofreiter, M., Mukhtarova, G., Baimukhanov, N., Lõugas, L., Onar, V., Stockhammer, P. W., Krause, J., Boldgiv, B., Undrakhbold, S., Erdenebaatar, D., Lepetz, S., Mashkour, M., Ludwig, A., Wallner, B., Merz, V., Merz, I., Zaibert, V., Willerslev, E., Sanz, P. L., Outram, A. K. & Orlando, L. A. A., 2018, In: Science. 360, 6384, p. 111-114 4 p.

  Research output: Contribution to journal › Journal article › Research › peer-review
  234 Citations (Scopus)
• 2017

  Ancient genomic changes associated with domestication of the horse

  Sanz, P. L., Gamba, C., Gaunitz, C., Der Sarkissian, C., Pruvost, M., Albrechtsen, A., Fages, A. A., Khan, N., Schubert, M., Jagannathan, V., Serres-Armero, A., Kuderna, L. F. K., Povolotskaya, I. S., Seguin-Orlando, A., Lepetz, S., Neuditschko, M., Thèves, C., Alquraishi, S., Alfarhan, A. H., AL-Rasheid, K. & 13 others, Rieder, S., Samashev, Z., Francfort, H-P., Benecke, N., Hofreiter, M., Ludwig, A., Keyser, C., Marques-Bonet, T., Ludes, B., Crubézy, E., Leeb, T., Willerslev, E. & Orlando, L. A. A., 28 Apr 2017, In: Science. 356, 6336, p. 442-445 4 p.

  Research output: Contribution to journal › Journal article › Research › peer-review
  147 Citations (Scopus)

• Experimental conditions improving in-solution target enrichment for ancient DNA

  Cruz-Dávalos, D. I., Llamas, B., Gaunitz, C., Fages, A. A., Gamba, C., Soubrier, J., Sanz, P. L., Seguin-Orlando, A., Pruvost, M., Alfarhan, A. H., Alquraishi, S. A., Al-Rasheid, K. A. S., Scheu, A., Beneke, N., Ludwig, A., Cooper, A., Willerslev, E. & Orlando, L. A. A., May 2017, In: Molecular Ecology Resources. 17, 3, p. 508-522 15 p.

  Research output: Contribution to journal › Journal article › Research › peer-review
  60 Citations (Scopus)

• Zonkey: a simple, accurate and sensitive pipeline to genetically identify equine Fl-hybrids in archaeological assemblages

  Schubert, M., Mashkour, M., Gaunitz, C., Fages, A. A., Seguin-Orlando, A., Sheikhi, S., Alfarhan, A. H., Alquraishi, S. A., Al-Rasheid, K. A. S., Chuang, R., Ermini, L., Gamba, C., Weinstock, J., Vedat, O. & Orlando, L. A. A., Feb 2017, In: Journal of Archaeological Science. 78, p. 147-157 11 p.

  Research output: Contribution to journal › Journal article › Research › peer-review
  43 Citations (Scopus)
• 2016

  Comparing the performance of three ancient DNA extraction methods for high-throughput sequencing

  Gamba, C., Hanghøj, K. E., Gaunitz, C., Alfarhan, A. H., Alquraishi, S. A., Al-Rasheid, K. A. S., Bradley, D. G. & Orlando, L. A. A., 2016, In: Molecular Ecology Resources. 16, 2, p. 459-469 11 p.

  Research output: Contribution to journal › Journal article › Research › peer-review
  125 Citations (Scopus)

• The evolutionary origin and genetic makeup of domestic horses

  Sanz, P. L., Fages, A. A., Gaunitz, C., Leonardi, M., Wagner, S., Khan, N., Hanghøj, K. E., Alquraishi, S. A., Alfarhan, A. H., Al-Rasheid, K. A., Der Sarkissian, C., Schubert, M. & Orlando, L. A. A., Oct 2016, In: Genetics. 204, 2, p. 423-434 12 p.

  Research output: Contribution to journal › Review › Research › peer-review
  61 Citations (Scopus)