A comprehensive reference genome assembly dataset of birds inhabiting Denmark, Greenland, and the Faroe Islands

Øksnebjerg, D. B., Nielsen, S. D., Chen, G., Andersen, M. J., Almagro, V., Ambrosini, R., Asai, S., Birks, S. M., Brumfield, R. T., Brlík, V., Carbajal, A., Burg, T. M., Bouwhuis, S., Wang, S., Chen, W., Claramunt, S., Lin, F., Xu, J., Dai, W. & Edwards, S. V. & 73 others, Ferraro, M. M., Fickel, J., Fjeldså, J., Formenti, G., Fuchs, J., Gallo, G. R., Gianfranceschi, L., Graves, G. R., Grzywaczewski, G., Han, W., Haryoko, T., Haruko, A., Hellgren, O., Illera, J. C., Jarvis, E. D., Johannessen, L. E., Johnsen, A., Johansson, U. S., Jønsson, K. A., Jiang, W., Jayne, V., Kawashima, T., Leaché, A. D., Lei, F., Lifjeld, J. T., Liedvogel, M., Liu, Y., Lovette, I. J., Mak, S. S. T., Nishiumi, I., O’Brien, M. F., Onuma, M., Petersen, B., Päckert, M., Pavia, M., Price, A., Quesada, J., Rahbek, C., Reeve, A. H., Rico-Guevara, A., Risch, M., Rohwer, V. G., Saitoh, T., Schmitt, C. J., Schnelle, A., Schweizer, M., Secomandi, S., Serres-Corral, P., Shopland, S., Song, G., Székely, T., Starikov, I. J., Stiller, J., Shen, X., Sun, Z., Tietze, D. T., Tomkovich, P. S., Trnka, A., Urrutia, A. O., Vignisson, S. R., Wanders, K., Wink, M., Winker, K., Wit, C. C., Withrow, J. J., Williamson, J. L., Yannic, G., Yamaguchi, N., Zhang, Z., Gilbert, M. T. P., Zhang, G., Feng, S. & Hosner, P. A., 7 Jul 2026, (E-pub ahead of print) In: GigaScience.

Research output: Contribution to journal › Journal article › Research › peer-review

Draft assemblies for 177 bird species enhance genus-level coverage

Chen, G., Wang, S., Øksnebjerg, D. B., Nielsen, S. D., Dai, W., Jiang, W., Liang, J., Han, W., Zhou, C., Li, Q., Petersen, B., Monadjem, A., Bhembe, Z. D., Maphalala, M., Ocampo, D., Sandoval, L., Fickel, J., Greenwood, A. D., Szentiks, C. A. & Roller, M. & 49 others, Birks, S. M., Leaché, A. D., Rico-Guevara, A., Fuchs, J., Vy, N. T., Hvilsom, C., Berner, J. A., Lifjeld, J. T., Johnsen, A., Johannessen, L. E., Labuschagne, K., Jønsson, K. A., Irestedt, M., Reeve, A. H., Joseph, L., Hellgren, O., Brumfield, R. T., Burg, T. M., Illera, J. C., Aleixo, A., Smit, B., Rheindt, F. E., Lee, J., Nishiumi, I., Quesada, J., Dumbacher, J. P., Schweizer, M., Andersen, M. J., Witt, C. C., Phillips, R. A., Prum, R. O., Zyskowski, K., Goodman, S. M., Raherilalao, M. J., Ottosson, U., Barshep, Y., Ivande, S., Brlík, V., Okposio, E., Koane, B., Haryoko, T., Jarvis, E. D., Rahbek, C., Lei, F., Graves, G. R., Feng, S., Hosner, P. A., Gilbert, M. T. P. & Zhang, G., 2026, In: GigaScience. 15, 11 p., giag045.

Research output: Contribution to journal › Journal article › Research › peer-review

Founder effects drive high mitochondrial dN/dS in island rails

Wanders, K., Oguzhan, Z., Stervander, M., Kimball, R. T., Braun, E. L., Dreyer, S., Øksnebjerg, D. B., Graves, G. R., Rahbek, C., Chen, G., Feng, S., Zhang, G. & Hosner, P. A., 2026, In: Evolution. 80, 6, p. 1343–1356

Research output: Contribution to journal › Journal article › Research › peer-review

A global initiative for ecological and evolutionary hologenomics

Leonard, A., Abalos, J. (Member of author collaboration), Adhola, T. (Member of author collaboration), Aguirre, W. (Member of author collaboration), Aizpurua, O. (Member of author collaboration), Ali, S. (Member of author collaboration), Andreone, F. (Member of author collaboration), Aubret, F. (Member of author collaboration), Ávila-Palma, H. D. (Member of author collaboration), Alcantara, L. F. B. (Member of author collaboration), Beltrán, J. F. (Member of author collaboration), Berg, R. (Member of author collaboration), Berg, T. B. (Member of author collaboration), Bertolino, S. (Member of author collaboration), Blumstein, D. T. (Member of author collaboration), Boldgiv, B. (Member of author collaboration), Borowski, Z. (Member of author collaboration), Boubli, J. P. (Member of author collaboration), Büchner, S. (Member of author collaboration) & Cabido, C. (Member of author collaboration) & 96 others, Camacho, C. (Member of author collaboration), Chaparro, J. C. (Member of author collaboration), Charmantier, A. (Member of author collaboration), D'Elía, G. (Member of author collaboration), da Silva, L. P. (Member of author collaboration), Dalsgaard, B., de Franceschi, C. (Member of author collaboration), de la Cruz, F. (Member of author collaboration), de la Sancha, N. U. (Member of author collaboration), Denoël, M. (Member of author collaboration), Eisenhofer, R. (Member of author collaboration), Feiner, N. (Member of author collaboration), Fernandes, J. M. (Member of author collaboration), Figuerola, J. (Member of author collaboration), Fusani, L. (Member of author collaboration), Gangoso, L. (Member of author collaboration), Gaun, N. (Member of author collaboration), Thomas, M. (Member of author collaboration), Gilbert, P. (Member of author collaboration), Gomez-Mestre, I. (Member of author collaboration), Graves, G. R. (Member of author collaboration), Groombridge, J. (Member of author collaboration), Hardouin, E. A. (Member of author collaboration), Hernández, M. (Member of author collaboration), Montalvo, L. G. H. (Member of author collaboration), Hodder, K. (Member of author collaboration), Hosner, P. A. (Member of author collaboration), Hurtado, N. (Member of author collaboration), Juste, J. (Member of author collaboration), Knowles, S. C. L. (Member of author collaboration), Kohl, K. D. (Member of author collaboration), Korine, C. (Member of author collaboration), Kramer-Schadt, S. (Member of author collaboration), Kornilev, Y. V. (Member of author collaboration), Lambin, X. (Member of author collaboration), Lattenkamp, E. Z. (Member of author collaboration), Lauritsen, J. (Member of author collaboration), Li, G. (Member of author collaboration), López, C. M. (Member of author collaboration), Baucells, A. L. (Member of author collaboration), Magory Cohen, T. (Member of author collaboration), Manzo, E. (Member of author collaboration), Marteau, M. (Member of author collaboration), Martin, L. B. (Member of author collaboration), Martin Bideguren, G. (Member of author collaboration), Mazzamuto, M. V. (Member of author collaboration), Monadjem, A. (Member of author collaboration), Nietlisbach, P. (Member of author collaboration), Øksnebjerg, D. B. (Member of author collaboration), Packer, J. G. (Member of author collaboration), Pepke, M. L. (Member of author collaboration), Peralta-Sánchez, J. M. (Member of author collaboration), Perdomo, A. (Member of author collaboration), i de Lanuza, G. P. (Member of author collaboration), Pietroni, C. (Member of author collaboration), Poyet, M. (Member of author collaboration), Rahbek, C. (Member of author collaboration), Ramaraj, T. (Member of author collaboration), Caldas, Y. R. (Member of author collaboration), Razgour, O. (Member of author collaboration), Rebelo, H. (Member of author collaboration), Reif, J. (Member of author collaboration), Rimbach, R. (Member of author collaboration), Rocha, R. (Member of author collaboration), Fernandes, C. R. (Member of author collaboration), Romeo, C. (Member of author collaboration), Ruuskanen, S. (Member of author collaboration), Sakaluk, S. K. (Member of author collaboration), Santicchia, F. (Member of author collaboration), Sarraude, T. (Member of author collaboration), Sørås, R. (Member of author collaboration), Spada, M. (Member of author collaboration), Steele, M. A. (Member of author collaboration), Stothart, M. R. (Member of author collaboration), Sunje, E. (Member of author collaboration), Sutton, A. O. (Member of author collaboration), Szulkin, M. (Member of author collaboration), Takahata, Y. (Member of author collaboration), Thompson, C. F. (Member of author collaboration), Thorup, K. (Member of author collaboration), Tomazetto, G. (Member of author collaboration), Torrent, L. (Member of author collaboration), Toshkova, N. (Member of author collaboration), Tranquillo, C. (Member of author collaboration), Turcios-Casco, M. A. (Member of author collaboration), Uller, T. (Member of author collaboration), van Riemsdijk, I., Velo-Antón, G. (Member of author collaboration), Verbeylen, G. (Member of author collaboration), Videvall, E. (Member of author collaboration), Voigt, C. C. (Member of author collaboration), Wauters, L. A. (Member of author collaboration), Wellenreuther, M. (Member of author collaboration), Yanchukov, A. (Member of author collaboration), Alberdi, A. & Earth Hologenome Initiative Consortium, 2024, In: Trends in Ecology and Evolution. 39, 7, p. 616-620 5 p.

Research output: Contribution to journal › Journal article › Research › peer-review

Draft genome assemblies of four manakins

Li, X., Gao, R., Chen, G., Price, A. L., Øksnebjerg, D. B., Hosner, P. A., Zhou, Y., Zhang, G. & Feng, S., 2022, In: Scientific Data. 9, 11 p., 564.

Research output: Contribution to journal › Journal article › Research › peer-review