Ivo Alexander Hendriks

Research output

Research output per year 2016 2021 2023 2024 2024

• 1384 Citations
• 30 Journal article
• 1 Book chapter
• 1 Review

Research output per year

Research output per year

Search results

• 2024

  A quantitative and site-specific atlas of the citrullinome reveals widespread existence of citrullination and insights into PADI4 substrates

  Rebak, A. S., Hendriks, I. A., Elsborg, J. D., Buch-Larsen, S. C., Nielsen, C. H., Terslev, L., Kirsch, R., Damgaard, D., Doncheva, N. T., Lennartsson, C., Rykær, M., Jensen, L. J., Christophorou, M. A. & Nielsen, M. L., 2024, In: Nature Structural and Molecular Biology. 31, 6, p. 977–995 34 p.

  Research output: Contribution to journal › Journal article › Research › peer-review

  Open Access

  File
  2 Citations (Scopus)

  4 Downloads (Pure)

• Catalytic and noncatalytic functions of DNA polymerase κ in translesion DNA synthesis

  Sellés-Baiget, S., Ambjørn, S. M., Carli, A., Hendriks, I. A., Gallina, I., Davey, N. E., Benedict, B., Zarantonello, A., Gadi, S. A., Meeusen, B., Hertz, E. P. T., Slappendel, L., Semlow, D., Sturla, S., Nielsen, M. L., Nilsson, J., Miller, T. C. R. & Duxin, J. P., 2024, (Accepted/In press) In: Nature Structural and Molecular Biology.

  Research output: Contribution to journal › Journal article › Research › peer-review

  Open Access

• Concerted SUMO-targeted ubiquitin ligase activities of TOPORS and RNF4 are essential for stress management and cell proliferation

  Liu, J. C. Y., Ackermann, L., Hoffmann, S., Gál, Z., Hendriks, I. A., Jain, C., Morlot, L., Tatham, M. H., McLelland, G-L., Hay, R. T., Nielsen, M. L., Brummelkamp, T., Haahr, P. & Mailand, N., 2024, In: Nature Structural and Molecular Biology. 31, 9, p. 1355–1367 32 p.

  Research output: Contribution to journal › Journal article › Research › peer-review

  Open Access

  File
  2 Citations (Scopus)

• DNAJC9 prevents CENP-A mislocalization and chromosomal instability by maintaining the fidelity of histone supply chains

  Balachandra, V., Shrestha, R. L., Hammond, C. M., Lin, S., Hendriks, I. A., Sethi, S. C., Chen, L., Sevilla, S., Caplen, N. J., Chari, R., Karpova, T. S., McKinnon, K., Todd, M. A., Koparde, V., Cheng, K. C-C., Nielsen, M. L., Groth, A. & Basrai, M. A., 2024, In: The EMBO Journal. 43, 11, p. 2166-2197

  Research output: Contribution to journal › Journal article › Research › peer-review
  3 Citations (Scopus)

• PARP1-dependent DNA-protein crosslink repair

  Fábián, Z., Kakulidis, E. S., Hendriks, I. A., Kühbacher, U., Larsen, N. B., Oliva-Santiago, M., Wang, J., Leng, X., Dirac-Svejstrup, A. B., Svejstrup, J. Q., Nielsen, M. L., Caldecott, K. & Duxin, J. P., 2024, In: Nature Communications. 15, 18 p., 6641.

  Research output: Contribution to journal › Journal article › Research › peer-review

  Open Access

  File
  1 Citation (Scopus)

  2 Downloads (Pure)

• Retron-Eco1 assembles NAD⁺-hydrolyzing filaments that provide immunity against bacteriophages

  Carabias, A., Camara-Wilpert, S., Mestre, M. R., Lopéz-Méndez, B., Hendriks, I. A., Zhao, R., Pape, T., Fuglsang, A., Luk, S. H. C., Nielsen, M. L., Pinilla-Redondo, R. & Montoya, G., 2024, In: Molecular Cell. 84, 11, p. 2185-2202.e12 31 p.

  Research output: Contribution to journal › Journal article › Research › peer-review
  1 Citation (Scopus)

• RNF212B E3 ligase is essential for crossover designation and maturation during male and female meiosis in the mouse

  Condezo, Y. B., Sainz-Urruela, R., Gomez-H, L., Salas-Lloret, D., Felipe-Medina, N., Bradley, R., Wolff, I. D., Tanis, S., Barbero, J. L., Sánchez-Martín, M., de Rooij, D., Hendriks, I. A., Nielsen, M. L., Gonzalez-Prieto, R., Cohen, P. E., Pendas, A. M. & Llano, E., 2024, In: Proceedings of the National Academy of Sciences of the United States of America. 121, 25, 12 p., e2320995121.

  Research output: Contribution to journal › Journal article › Research › peer-review

  Open Access

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• VCF1 is a p97/VCP cofactor promoting recognition of ubiquitylated p97-UFD1-NPL4 substrates

  Mirsanaye, A. S., Hoffmann, S., Weisser, M., Mund, A., Lopez Mendez, B., Typas, D., van den Boom, J., Benedict, B., Hendriks, I. A., Nielsen, M. L., Meyer, H., Duxin, J. P., Montoya, G. & Mailand, N., 2024, In: Nature Communications. 15, 1, 16 p., 2459.

  Research output: Contribution to journal › Journal article › Research › peer-review

  Open Access

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  17 Downloads (Pure)
• 2023

  Characterizing ADP-Ribosylation Sites Using Af1521 Enrichment Coupled to ETD-Based Mass Spectrometry

  Anagho, H. A., Elsborg, J. D., Hendriks, I. A., Buch-Larsen, S. C. & Nielsen, M. L., 2023, Poly(ADP-Ribose) Polymerase: Methods and Protocols. Tulin, A. V. (ed.). Humana Press, p. 251-270 (Methods in Molecular Biology, Vol. 2609).

  Research output: Chapter in Book/Report/Conference proceeding › Book chapter › Research › peer-review
  5 Citations (Scopus)

• Characterizing citrullination by mass spectrometry-based proteomics

  Rebak, A. S., Hendriks, I. A. & Nielsen, M. L., 2023, In: Philosophical transactions of the Royal Society of London. Series B, Biological sciences. 378, 1890, 14 p., 20220237.

  Research output: Contribution to journal › Review › Research › peer-review

  Open Access

  File
  4 Citations (Scopus)

  9 Downloads (Pure)

• DAXX adds a de novo H3.3K9me3 deposition pathway to the histone chaperone network

  Carraro, M., Hendriks, I. A., Hammond, C. M., Solis-Mezarino, V., Völker-Albert, M., Elsborg, J. D., Weisser, M. B., Spanos, C., Montoya, G., Rappsilber, J., Imhof, A., Nielsen, M. L. & Groth, A., 2023, In: Molecular Cell. 83, 7, p. 1075-1092.e9 28 p.

  Research output: Contribution to journal › Journal article › Research › peer-review

  Open Access

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  22 Citations (Scopus)

  45 Downloads (Pure)

• Profiling ubiquitin signalling with UBIMAX reveals DNA damage- and SCFβ-Trcp1-dependent ubiquitylation of the actin-organizing protein Dbn1

  Colding-Christensen, C. S., Kakulidis, E. S., Arroyo-Gomez, J., Hendriks, I. A., Arkinson, C., Fábián, Z., Gambus, A., Mailand, N., Duxin, J. P. & Nielsen, M. L., 2023, In: Nature Communications. 14, 19 p., 8293.

  Research output: Contribution to journal › Journal article › Research › peer-review

  Open Access

  File
  1 Citation (Scopus)

  14 Downloads (Pure)

• The SUMO–NIP45 pathway processes toxic DNA catenanes to prevent mitotic failure

  Hertz, E. P. T., Vega, I. A. D., Kruse, T., Wang, Y., Hendriks, I. A., Bizard, A. H., Eugui-Anta, A., Hay, R. T., Nielsen, M. L., Nilsson, J., Hickson, I. D. & Mailand, N., 2023, In: Nature Structural and Molecular Biology. 30, p. 1303-1313

  Research output: Contribution to journal › Journal article › Research › peer-review

  Open Access

  File
  6 Citations (Scopus)

  20 Downloads (Pure)

• Transient suppression of SUMOylation in embryonic stem cells generates embryo-like structures

  Cossec, J. C., Traboulsi, T., Sart, S., Loe-Mie, Y., Guthmann, M., Hendriks, I. A., Theurillat, I., Nielsen, M. L., Torres-Padilla, M. E., Baroud, C. N. & Dejean, A., 2023, In: Cell Reports. 42, 4, 27 p., 112380.

  Research output: Contribution to journal › Journal article › Research › peer-review

  Open Access

  File
  5 Citations (Scopus)

  18 Downloads (Pure)
• 2022

  SCAI promotes error-free repair of DNA interstrand crosslinks via the Fanconi anemia pathway

  Schubert, L., Hendriks, I. A., Hertz, E. P. T., Wu, W., Sellés-Baiget, S., Hoffmann, S., Viswalingam, K. S., Gallina, I., Pentakota, S., Benedict, B., Johansen, J., Apelt, K., Luijsterburg, M. S., Rasmussen, S., Lisby, M., Liu, Y., Nielsen, M. L., Mailand, N. & Duxin, J. P., 2022, In: EMBO Reports. 23, 4, 20 p., e53639.

  Research output: Contribution to journal › Journal article › Research › peer-review

  Open Access

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  12 Citations (Scopus)

  61 Downloads (Pure)

• Waves of sumoylation support transcription dynamics during adipocyte differentiation

  Zhao, X., Hendriks, I. A., Le Gras, S., Ye, T., Ramos-Alonso, L., Nguea P, A., Lien, G. F., Ghasemi, F., Klungland, A., Jost, B., Enserink, J. M., Nielsen, M. L. & Chymkowitch, P., 2022, In: Nucleic Acids Research. 50, 3, p. 1351-1369 19 p.

  Research output: Contribution to journal › Journal article › Research › peer-review

  Open Access

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  7 Citations (Scopus)

  19 Downloads (Pure)
• 2021

  DNAJC9 integrates heat shock molecular chaperones into the histone chaperone network

  Hammond, C. M., Bao, H., Hendriks, I. A., Carraro, M., García-Nieto, A., Liu, Y., Reverón-Gómez, N., Spanos, C., Chen, L., Rappsilber, J., Nielsen, M. L., Patel, D. J., Huang, H. & Groth, A., 2021, In: Molecular Cell. 81, 12, p. 2533-2548

  Research output: Contribution to journal › Journal article › Research › peer-review

  Open Access

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  30 Citations (Scopus)

  87 Downloads (Pure)

• Identification of Protein Direct Interactome with Genetic Code Expansion and Search Engine OpenUaa

  Liu, C., Wu, T., Shu, X., Li, S-T., Wang, D. R., Wang, N., Zhou, R., Yang, H., Jiang, H., Hendriks, I. A., Gong, P., Zhang, L., Nielsen, M. L., Li, K., Wang, L. & Yang, B., 2021, In: Advanced Biology. 5, 3, 11 p., 2000308.

  Research output: Contribution to journal › Journal article › Research › peer-review
  17 Citations (Scopus)

• MaxQuant. Live Enables Enhanced Selectivity and Identification of Peptides Modified by Endogenous SUMO and Ubiquitin

  Hendriks, I. A., Akimov, V., Blagoev, B. & Nielsen, M. L., 2021, In: Journal of Proteome Research. 20, 4, p. 2042-2055 14 p.

  Research output: Contribution to journal › Journal article › Research › peer-review

  Open Access

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  10 Citations (Scopus)

  34 Downloads (Pure)

• Mechanism and function of DNA replication-independent DNA-protein crosslink repair via the SUMO-RNF4 pathway

  Liu, J. C. Y., Kühbacher, U., Larsen, N. B., Borgermann, N., Garvanska, D. H., Hendriks, I. A., Ackermann, L., Haahr, P., Gallina, I., Guérillon, C., Branigan, E., Hay, R. T., Azuma, Y., Nielsen, M. L., Duxin, J. P. & Mailand, N., 2021, In: E M B O Journal. 40, 21 p., e107413.

  Research output: Contribution to journal › Journal article › Research › peer-review

  Open Access

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  95 Downloads (Pure)

• Temporal and site-specific adp-ribosylation dynamics upon different genotoxic stresses

  Buch-Larsen, S. C., Rebak, A. K. L. F. S., Hendriks, I. A. & Nielsen, M. L., 2021, In: Cells. 10, 11, 16 p., 2927.

  Research output: Contribution to journal › Journal article › Research › peer-review

  Open Access

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  19 Downloads (Pure)

• The regulatory landscape of the human HPF1-and ARH3-dependent ADP-ribosylome

  Hendriks, I. A., Buch-Larsen, S. C., Prokhorova, E., Elsborg, J. D., Rebak, A. K. L. F. S., Zhu, K., Ahel, D., Lukas, C., Ahel, I. & Nielsen, M. L., 2021, In: Nature Communications. 12, 1, 16 p., 5893.

  Research output: Contribution to journal › Journal article › Research › peer-review

  Open Access

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  52 Citations (Scopus)

  41 Downloads (Pure)

• The ubiquitin ligase RFWD3 is required for translesion DNA synthesis

  Gallina, I., Hendriks, I. A., Hoffmann, S., Larsen, N. B., Johansen, J., Colding-Christensen, C. S., Schubert, L., Sellés-Baiget, S., Fábián, Z., Kühbacher, U., Gao, A. O., Räschle, M., Rasmussen, S., Nielsen, M. L., Mailand, N. & Duxin, J. P., 2021, In: Molecular Cell. 81, 3, p. 442-458.e9 27 p.

  Research output: Contribution to journal › Journal article › Research › peer-review

  Open Access

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  47 Citations (Scopus)

  148 Downloads (Pure)
• 2020

  Extensive SUMO Modification of Repressive Chromatin Factors Distinguishes Pluripotent from Somatic Cells

  Theurillat, I., Hendriks, I. A., Cossec, J-C., Andrieux, A., Nielsen, M. L. & Dejean, A., 2020, In: Cell Reports. 32, 11, 20 p., 108146.

  Research output: Contribution to journal › Journal article › Research › peer-review

  Open Access

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  4 Citations (Scopus)

  40 Downloads (Pure)

• Mapping Physiological ADP-Ribosylation Using Activated Ion Electron Transfer Dissociation

  Buch-Larsen, S. C., Hendriks, I. A., Lodge, J. M., Rykaer, M., Furtwangler, B., Shishkova, E., Westphall, M. S., Coon, J. J. & Nielsen, M. L., 2020, In: Cell Reports. 32, 12, 17 p., 108176.

  Research output: Contribution to journal › Journal article › Research › peer-review

  Open Access

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  74 Citations (Scopus)

  83 Downloads (Pure)

• Multisite SUMOylation restrains DNA polymerase η interactions with DNA damage sites

  Guérillon, C., Smedegaard, S., Hendriks, I. A., Nielsen, M. L. & Mailand, N., 2020, In: Journal of Biological Chemistry. 295, p. 8350-8362

  Research output: Contribution to journal › Journal article › Research › peer-review

  Open Access

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  16 Citations (Scopus)

  105 Downloads (Pure)
• 2019

  An advanced strategy for comprehensive profiling of ADP-ribosylation sites using mass spectrometry-based proteomics

  Hendriks, I. A., Larsen, S. C. & Nielsen, M. L., 2019, In: Molecular and Cellular Proteomics. 18, 5, p. 1010-1026

  Research output: Contribution to journal › Journal article › Research › peer-review

  Open Access

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  106 Citations (Scopus)

  36 Downloads (Pure)

• SUMOylation promotes protective responses to DNA-protein crosslinks

  Borgermann, N., Ackermann, L., Schwertman, P., Hendriks, I. A., Thijssen, K., Liu, J. C., Lans, H., Nielsen, M. L. & Mailand, N., 2019, In: E M B O Journal. 38, 17 p., e101496.

  Research output: Contribution to journal › Journal article › Research › peer-review

  Open Access

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  79 Citations (Scopus)

  254 Downloads (Pure)
• 2018

  Site-specific characterization of endogenous SUMOylation across species and organs

  Hendriks, I. A., Lyon, D., Su, D., Skotte, N. H., Daniel, J. A., Jensen, L. J. & Nielsen, M. L., 2018, In: Nature Communications. 9, p. 1-17 2456.

  Research output: Contribution to journal › Journal article › Research › peer-review

  Open Access

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  140 Citations (Scopus)

  246 Downloads (Pure)

• Systems-wide Analysis of Serine ADP-Ribosylation Reveals Widespread Occurrence and Site-Specific Overlap with Phosphorylation

  Larsen, S. C., Hendriks, I. A., Lyon, D., Jensen, L. J. & Nielsen, M. L., 2018, In: Cell Reports. 24, 9, p. 2493-2505

  Research output: Contribution to journal › Journal article › Research › peer-review

  Open Access

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  116 Citations (Scopus)

  189 Downloads (Pure)
• 2017

  Site-specific mapping of the human SUMO proteome reveals co-modification with phosphorylation

  Hendriks, I. A., Lyon, D., Young, C., Jensen, L. J., Vertegaal, A. C. O. & Nielsen, M. L., Mar 2017, In: Nature Structural and Molecular Biology. 24, 3, p. 325-336 12 p.

  Research output: Contribution to journal › Journal article › Research › peer-review
  259 Citations (Scopus)
• 2016

  A comprehensive compilation of SUMO proteomics

  Hendriks, I. A. & Vertegaal, A. C. O., Sep 2016, In: Nature Reviews. Molecular Cell Biology. 17, 9, p. 581-95 15 p.

  Research output: Contribution to journal › Journal article › Research › peer-review
  363 Citations (Scopus)