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Find more information at: https://renew.ku.dk/research/reseach-groups/sedzinski-group/
Collaborations and top research areas from the last five years
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Protocol for inferring mechanical stresses in tissues using ForSys, an open-source Python tool
Borges, A., Miranda-Rodríguez, J. R., Ceccarelli, A. S., Ventura, G., Sedzinski, J., López-Schier, H. & Chara, O., 2026, In: STAR Protocols. 7, 2, 21 p., 104595.Research output: Contribution to journal › Journal article › Research › peer-review
Open AccessFile -
Single-cell morphodynamics predict cell fate decisions during mucociliary epithelial differentiation
Tolonen, M., Xu, Z., Beker, O., Kapoor, V., Dumitrascu, B. & Sedzinski, J., 2026, (E-pub ahead of print) In: Molecular Systems Biology.Research output: Contribution to journal › Journal article › Research › peer-review
Open Access -
Cell-context response to germ layer differentiation signals is predetermined by the epigenome in regionalized epiblast populations
Menezes, N. A., Peterson, K. J., Guo, X., Castiglioni, V., Kalvisa, A., Filimonow, K., Schachter, K., Schuh, C. M., Pasias, A., Mariani, L., Brickman, J. M., Sedzinski, J. & Ferretti, E., 2025, In: Nature Communications. 16, 1, 20 p., 5000.Research output: Contribution to journal › Journal article › Research › peer-review
Open AccessFile3 Citations (Scopus)27 Downloads (Pure) -
Effects of n-3 Long-Chain Polyunsaturated Fatty Acid and Vitamin D Supplementation on Transcriptional Profiles of Human Lung Organoids
Ali, M., Mortensen, M. S., Bæk, O., Brustad, N., Wang, T., Chen, L., Kim, M., Pedersen, C.-E. T., Lawley, T. D., Pasias, A., Sedzinski, J., Stokholm, J., Bønnelykke, K. & Chawes, B., 2025, In: Metabolites. 15, 10, 19 p., 670.Research output: Contribution to journal › Journal article › Research › peer-review
Open AccessFile19 Downloads (Pure) -
ForSys: Non-invasive stress inference from time-lapse microscopy
Borges, A., Miranda-Rodríguez, J. R., Ceccarelli, A. S., Ventura, G., Sedzinski, J., López-Schier, H. & Chara, O., 2025, In: iScience. 28, 11, 19 p., 113685.Research output: Contribution to journal › Journal article › Research › peer-review
Open AccessFile3 Citations (Scopus)15 Downloads (Pure) -
nf-core/marsseq: systematic preprocessing pipeline for MARS-seq experiments
Proks, M., Alejandro Romero Herrera, J., Sedzinski, J. & Brickman, J. M., 2025, In: Bioinformatics Advances. 5, 1, 6 p., vbaf089.Research output: Contribution to journal › Journal article › Research › peer-review
Open AccessFile27 Downloads (Pure) -
Pancreatic alpha and beta cell fate choice is directed by apical-basal polarity dynamics
Tiemann, U., Tian, C., Hermann, F., Proks, M., Skovgaard, E., Kulik, I., Di, Y., Sedzinski, J. & Semb, T. H., 2025, In: Developmental Cell. 60, 13, p. 1871-1883, e1-e5Research output: Contribution to journal › Journal article › Research › peer-review
Open AccessFile7 Citations (Scopus)10 Downloads (Pure) -
A single-cell, time-resolved profiling of Xenopus mucociliary epithelium reveals nonhierarchical model of development
Lee, J., Møller, A. F., Chae, S., Bussek, A., Park, T. J., Kim, Y., Lee, H. S., Pers, T. H., Kwon, T., Sedzinski, J. & Natarajan, K. N., 2023, In: Science Advances. 9, 14, p. eadd5745 23 p.Research output: Contribution to journal › Journal article › Research › peer-review
Open AccessFile17 Citations (Scopus)102 Downloads (Pure)