Jazmin Ramos Madrigal

Research output

Research output per year 2015 2018 2019 2020 2021 2022 2023 2024 2024

• 1512 Citations
• 39 Journal article
• 3 Conference abstract in journal
• 2 Preprint
• 1 Ph.D. thesis
• 3 More
  • 1 Conference abstract for conference
  • 1 Letter
  • 1 Review

Research output per year

Research output per year

Search results

• 2024

  Beyond population size: Whole-genome data reveal bottleneck legacies in the peninsular Italian wolf

  Battilani, D., Gargiulo, R., Caniglia, R., Fabbri, E., Ramos-Madrigal, J., Fontsere, C., Ciucani, M. M., Gopalakrishnan, S., Girardi, M., Fracasso, I., Mastroiaco, M., Ciucci, P. & Vernesi, C., 27 Aug 2024, (E-pub ahead of print) In: The Journal of Heredity. 14 p.

  Research output: Contribution to journal › Journal article › Research › peer-review

  Open Access

• Burial of two closely related infants under a “dragon stone” from prehistoric Armenia

  Bobokhyan, A., Iraeta-Orbegozo, M., McColl, H., Mkrtchyan, R., Simonyan, H., Ramos-Madrigal, J., Andrades-Valtueña, A., Hnila, P., Gilibert, A. & Margaryan, A., 2024, In: Journal of Archaeological Science: Reports. 57, 15 p., 104601.

  Research output: Contribution to journal › Journal article › Research › peer-review

  Open Access

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  4 Downloads (Pure)

• Deep-time phylogenetic inference by paleoproteomic analysis of dental enamel

  Taurozzi, A. J., Rüther, P. L., Patramanis, I., Koenig, C., Paterson, R. S., Madupe, P. P., Harking, F. S., Welker, F., Mackie, M., Ramos-Madrigal, J., Olsen, J. V. & Cappellini, E., 2024, In: Nature Protocols. 19, 7, p. 2085-2116

  Research output: Contribution to journal › Journal article › Research › peer-review
  3 Citations (Scopus)

• The ancestral environment of teosinte populations shapes their root microbiome

  Barnes, C. J., Bünner, M. S., Ramírez-Flores, M. R., Nielsen, I. B., Ramos-Madrigal, J., Zharikova, D., McLaughlin, C. M., Gilbert, M. T. & Sawers, R. J. H., 2024, In: Environmental Microbiome. 19, 14 p., 64.

  Research output: Contribution to journal › Journal article › Research › peer-review

  Open Access

  File
  2 Downloads (Pure)
• 2023

  Ancient DNA from a lost Negev Highlands desert grape reveals a Late Antiquity wine lineage

  Cohen, P., Bacilieri, R., Ramos-Madrigal, J., Privman, E., Boaretto, E., Weber, A., Fuks, D., Weiss, E., Erickson-Gini, T., Bucking, S., Tepper, Y., Cvikel, D., Schmidt, J., Gilbert, M. T. P., Wales, N., Bar-Oz, G. & Meiri, M., 2023, In: PNAS. 120, 17, 8 p., e2213563120.

  Research output: Contribution to journal › Journal article › Research › peer-review

  Open Access

  File
  14 Citations (Scopus)

  21 Downloads (Pure)

• Conservation implications of elucidating the Korean wolf taxonomic ambiguity through whole-genome sequencing

  Hernández-Alonso, G., Ramos-Madrigal, J., Sun, X., Scharff-Olsen, C. H., Sinding, M. H. S., Martins, N. F., Ciucani, M. M., Mak, S. S. T., Lanigan, L. T., Clausen, C. G., Bhak, J., Jeon, S., Kim, C., Eo, K. Y., Cho, S. H., Boldgiv, B., Gantulga, G., Unudbayasgalan, Z., Kosintsev, P. A., Stenøien, H. K. & 2 others, Gilbert, M. T. P. & Gopalakrishnan, S., 2023, In: Ecology and Evolution. 13, 8, 15 p., e10404.

  Research output: Contribution to journal › Journal article › Research › peer-review

  Open Access

  File
  1 Citation (Scopus)

  32 Downloads (Pure)

• PaleoProPhyler: a reproducible pipeline for phylogenetic inference using ancient proteins

  Patramanis, I., Ramos-Madrigal, J., Cappellini, E. & Racimo, F., 2023, In: Peer Community Journal. 3, 12 p., e112.

  Research output: Contribution to journal › Journal article › Research › peer-review

  Open Access

  File
  3 Citations (Scopus)

  6 Downloads (Pure)

• Proteomic identification of beer brewing products in the ground layer of Danish Golden Age paintings

  Di Gianvincenzo, F., Andersen, C. K., Filtenborg, T., Mackie, M., Ernst, M., Madrigal, J. R., Olsen, J. V., Wadum, J. & Cappellini, E., 2023, In: Science Advances. 9, 21, 13 p., eade7686.

  Research output: Contribution to journal › Journal article › Research › peer-review

  Open Access

  File
  1 Citation (Scopus)

  29 Downloads (Pure)

• Redefining the Evolutionary History of the Rock Dove, Columba livia, Using Whole Genome Sequences

  Hernández-Alonso, G., Ramos-Madrigal, J., van Grouw, H., Ciucani, M. M., Cavill, E. L., Sinding, M-H. S., Gopalakrishnan, S., Pacheco, G. & P. Gilbert, M. T., 2023, In: Molecular Biology and Evolution. 40, 11, 17 p., msad243.

  Research output: Contribution to journal › Journal article › Research › peer-review

  Open Access

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  4 Citations (Scopus)

  14 Downloads (Pure)

• The ancestry and geographical origins of St Helena's liberated Africans: [incl. erratum]

  Sandoval-Velasco, M., Jagadeesan, A., Ramos-Madrigal, J., Ávila-Arcos, M. C., Fortes-Lima, C. A., Watson, J., Johannesdóttir, E., Cruz-Dávalos, D. I., Gopalakrishnan, S., Moreno-Mayar, J. V., Niemann, J., Renaud, G., Brown, K. A. R., Bennett, H., Pearson, A., Helgason, A., Gilbert, M. T. P. & Schroeder, H., 2023, In: American Journal of Human Genetics. 110, 9, p. 1590-1599 10 p.

  Research output: Contribution to journal › Journal article › Research › peer-review

  Open Access

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  50 Downloads (Pure)

• The extinct Sicilian wolf shows a complex history of isolation and admixture with ancient dogs

  Ciucani, M. M., Ramos-Madrigal, J., Hernández-Alonso, G., Carmagnini, A., Aninta, S. G., Sun, X., Scharff-Olsen, C. H., Lanigan, L. T., Fracasso, I., Clausen, C. G., Aspi, J., Kojola, I., Baltrūnaitė, L., Balčiauskas, L., Moore, J., Åkesson, M., Saarma, U., Hindrikson, M., Hulva, P., Bolfíková, B. Č. & 19 others, Nowak, C., Godinho, R., Smith, S., Paule, L., Nowak, S., Mysłajek, R. W., Lo Brutto, S., Ciucci, P., Boitani, L., Vernesi, C., Stenøien, H. K., Smith, O., Frantz, L., Rossi, L., Angelici, F. M., Cilli, E., Sinding, M. H. S., Gilbert, M. T. P. & Gopalakrishnan, S., 2023, In: iScience. 26, 8, 22 p., 107307.

  Research output: Contribution to journal › Journal article › Research › peer-review

  Open Access

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  1 Citation (Scopus)

  24 Downloads (Pure)
• 2022

  Differential expression profiling of heat stressed tardigrades reveals major shift in the transcriptome

  Neves, R. C., Møbjerg, A., Kodama, M., Ramos-Madrigal, J., Gilbert, M. T. P. & Møbjerg, N., 2022, In: Comparative Biochemistry and Physiology - Part A: Molecular & Integrative Physiology. 267, 7 p., 111169.

  Research output: Contribution to journal › Journal article › Research › peer-review

  Open Access

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  13 Citations (Scopus)

  38 Downloads (Pure)

• Extreme freeze-tolerance in cryophilic tardigrades relies on controlled ice formation but does not involve significant change in transcription: [Corrigendum]

  Møbjerg, A., Kodama, M., Ramos-Madrigal, J., Neves, R. C., Jørgensen, A., Schiøtt, M., Gilbert, M. T. P. & Møbjerg, N., 2022, In: Comparative Biochemistry and Physiology - Part A: Molecular & Integrative Physiology. 271, 8 p., 111245.

  Research output: Contribution to journal › Journal article › Research › peer-review

  Open Access

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  26 Downloads (Pure)

• Grey wolf genomic history reveals a dual ancestry of dogs

  Bergström, A., Stanton, D. W. G., Taron, U. H., Frantz, L., Sinding, M. H. S., Ersmark, E., Pfrengle, S., Cassatt-Johnstone, M., Lebrasseur, O., Girdland-Flink, L., Fernandes, D. M., Ollivier, M., Speidel, L., Gopalakrishnan, S., Westbury, M. V., Ramos-Madrigal, J., Feuerborn, T. R., Reiter, E., Gretzinger, J., Münzel, S. C. & 61 others, Swali, P., Conard, N. J., Carøe, C., Haile, J., Linderholm, A., Androsov, S., Barnes, I., Baumann, C., Benecke, N., Bocherens, H., Brace, S., Carden, R. F., Drucker, D. G., Fedorov, S., Gasparik, M., Germonpré, M., Grigoriev, S., Groves, P., Hertwig, S. T., Ivanova, V. V., Janssens, L., Jennings, R. P., Kasparov, A. K., Kirillova, I. V., Kurmaniyazov, I., Kuzmin, Y. V., Kosintsev, P. A., Lázničková-Galetová, M., Leduc, C., Nikolskiy, P., Nussbaumer, M., O’Drisceoil, C., Orlando, L., Outram, A., Pavlova, E. Y., Perri, A. R., Pilot, M., Pitulko, V. V., Plotnikov, V. V., Protopopov, A. V., Rehazek, A., Sablin, M., Seguin-Orlando, A., Storå, J., Verjux, C., Zaibert, V. F., Zazula, G., Crombé, P., Hansen, A. J., Willerslev, E., Leonard, J. A., Götherström, A., Pinhasi, R., Schuenemann, V. J., Hofreiter, M., Gilbert, M. T. P., Shapiro, B., Larson, G., Krause, J., Dalén, L. & Skoglund, P., 2022, In: Nature. 607, 7918, p. 313-320

  Research output: Contribution to journal › Journal article › Research › peer-review

  Open Access

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  65 Citations (Scopus)

  37 Downloads (Pure)

• PaleoProPhyler: a reproducible pipeline for phylogenetic inference using ancient proteins

  Patramanis, I., Madrigal, J. R., Cappellini, E. & Racimo, F., 2022, bioRxiv, 6 p.

  Research output: Working paper › Preprint › Research

  File
  16 Downloads (Pure)

• Rhizosphere bacterial communities differ among traditional maize landraces

  Lund, M., Rasmussen, J. A., Ramos-Madrigal, J., Sawers, R., Gilbert, M. T. P. & Barnes, C. J., 2022, In: Environmental DNA. 4, 6, p. 1241-1249 9 p.

  Research output: Contribution to journal › Journal article › Research › peer-review

  Open Access

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  9 Citations (Scopus)

  33 Downloads (Pure)

• The feasibility of palaeoproteomics for studying ancient hominins from South Africa

  Madupe, P., Hlazo, N., Ruther, P. L., Mackie, M., Welker, F., Madrigal, J. R., Patramanis, I., Racimo, F., Schroeder, L., Olsen, J. V., Ackermann, R. R. & Cappellini, E., 2022, In: American journal of biological anthropology. 177, S73, p. 112 1 p.

  Research output: Contribution to journal › Conference abstract in journal › Research › peer-review

  File

• Unraveling Signatures of Local Adaptation among Indigenous Groups from Mexico

  García-Ortiz, H., Barajas-Olmos, F., Contreras-Cubas, C., Reynolds, A. W., Flores-Huacuja, M., Snow, M., Ramos-Madrigal, J., Mendoza-Caamal, E., Baca, P., López-Escobar, T. A., Bolnick, D. A., Flores-Martínez, S. E., Ortiz-Lopez, R., Kostic, A. D., Villafan-Bernal, J. R., Galaviz-Hernández, C., Centeno-Cruz, F., García-Zapién, A. G., Monge-Cázares, T., Lazalde-Ramos, B. P. & 7 others, Loeza-Becerra, F., Abrahantes-Pérez, M. D. C., Rangel-Villalobos, H., Sosa-Macías, M., Rojas-Martínez, A., Martínez-Hernández, A. & Orozco, L., 2022, In: Genes. 13, 12, 10 p., 2251.

  Research output: Contribution to journal › Journal article › Research › peer-review

  Open Access

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  3 Citations (Scopus)

  11 Downloads (Pure)
• 2021

  Extended survival of Pleistocene Siberian wolves into the early 20th century on the island of Honshu

  Niemann, J., Gopalakrishnan, S., Yamaguchi, N., Ramos-Madrigal, J., Wales, N., Gilbert, M. T. P. & Sinding, M-H. S., 2021, In: iScience. 24, 25 p., 101904.

  Research output: Contribution to journal › Journal article › Research › peer-review

  Open Access

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  6 Citations (Scopus)

  86 Downloads (Pure)

• Historical population declines prompted significant genomic erosion in the northern and southern white rhinoceros (Ceratotherium simum)

  Sánchez-Barreiro, F., Gopalakrishnan, S., Ramos-Madrigal, J., Westbury, M. V., de Manuel, M., Margaryan, A., Ciucani, M. M., Vieira, F. G., Patramanis, Y., Kalthoff, D. C., Timmons, Z., Sicheritz-Pontén, T., Dalén, L., Ryder, O. A., Zhang, G., Marques-Bonet, T., Moodley, Y. & Gilbert, M. T. P., 2021, In: Molecular Ecology. 30, 23, p. 6355-6369 15 p.

  Research output: Contribution to journal › Journal article › Research › peer-review

  Open Access

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  27 Downloads (Pure)

• Kouprey (Bos sauveli) genomes unveil polytomic origin of wild Asian Bos

  Sinding, M-H. S., Ciucani, M. M., Ramos-Madrigal, J., Carmagnini, A., Rasmussen, J. A., Feng, S., Chen, G., Vieira, F. G., Mattiangeli, V., Ganjoo, R. K., Larson, G., Sicheritz-Pontén, T., Petersen, B., Frantz, L., Gilbert, M. T. P. & Bradley, D. G., 2021, In: iScience. 24, 11, 18 p., 103226.

  Research output: Contribution to journal › Journal article › Research › peer-review

  Open Access

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  8 Citations (Scopus)

  20 Downloads (Pure)

• Modern Siberian dog ancestry was shaped by several thousand years of Eurasian-wide trade and human dispersal

  Feuerborn, T. R., Carmagnini, A., Losey, R. J., Nomokonova, T., Askeyev, A., Askeyev, I., Askeyev, O., Antipina, E. E., Appelt, M., Bachura, O. P., Beglane, F., Bradley, D. G., Daly, K. G., Gopalakrishnan, S., Gregersen, K. M., Guo, C., Gusev, A. V., Jones, C., Kosintsev, P. A., Kuzmin, Y. V. & 17 others, Mattiangeli, V., Perri, A. R., Plekhanov, A. V., Ramos-Madrigal, J., Schmidt, A. L., Shaymuratova, D., Smith, O., Yavorskaya, L. V., Zhang, G., Willerslev, E., Meldgaard, M., Gilbert, M. T. P., Larson, G., Dalén, L., Hansen, A. J., Sinding, M. H. S. & Frantz, L., 2021, In: Proceedings of the National Academy of Sciences of the United States of America. 118, 39, e2100338118.

  Research output: Contribution to journal › Journal article › Research › peer-review

  Open Access

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  16 Citations (Scopus)

  67 Downloads (Pure)

• The genomic landscape of Mexican Indigenous populations brings insights into the peopling of the Americas

  García-Ortiz, H., Barajas-Olmos, F., Contreras-Cubas, C., Cid-Soto, M. Á., Córdova, E. J., Centeno-Cruz, F., Mendoza-Caamal, E., Cicerón-Arellano, I., Flores-Huacuja, M., Baca, P., Bolnick, D. A., Snow, M., Flores-Martínez, S. E., Ortiz-Lopez, R., Reynolds, A. W., Blanchet, A., Morales-Marín, M., Velázquez-Cruz, R., Kostic, A. D., Galaviz-Hernández, C. & 20 others, García-Zapién, A. G., Jiménez-López, J. C., León-Reyes, G., Salas-Bautista, E. G., Lazalde-Ramos, B. P., Jiménez-Ruíz, J. L., Salas-Martínez, G., Ramos-Madrigal, J., Mirzaeicheshmeh, E., Saldaña-Alvarez, Y., del Carmen Abrahantes-Pérez, M., Loeza-Becerra, F., Mojica-Espinosa, R., Sánchez-Quinto, F., Rangel-Villalobos, H., Sosa-Macías, M., Sánchez-Corona, J., Rojas-Martinez, A., Martínez-Hernández, A. & Orozco, L., 2021, In: Nature Communications. 12, 12 p., 5942.

  Research output: Contribution to journal › Journal article › Research › peer-review

  Open Access

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  29 Citations (Scopus)

  13 Downloads (Pure)
• 2020

  Ancient Plant Genomics in Archaeology, Herbaria, and the Environment

  Kistler, L., Bieker, V. C., Martin, M. D., Pedersen, M. W., Ramos Madrigal, J. & Wales, N., 2020, In: Annual Review of Plant Biology. 71, p. 605-629 25 p.

  Research output: Contribution to journal › Review › Research › peer-review

  File
  38 Citations (Scopus)

  20 Downloads (Pure)

• Arctic-adapted dogs emerged at the Pleistocene-Holocene transition

  Sinding, M. H. S., Gopalakrishnan, S., Ramos-Madrigal, J., de Manuel, M., Pitulko, V. V., Kuderna, L., Feuerborn, T. R., Frantz, L. A. F., Vieira, F. G., Niemann, J., Samaniego Castruita, J. A., Carøe, C., Andersen-Ranberg, E. U., Jordan, P. D., Pavlova, E. Y., Nikolskiy, P. A., Kasparov, A. K., Ivanova, V. V., Willerslev, E., Skoglund, P. & 15 others, Fredholm, M., Wennerberg, S. E., Heide-Jørgensen, M. P., Dietz, R., Sonne, C., Meldgaard, M., Dalén, L., Larson, G., Petersen, B., Sicheritz-Pontén, T., Bachmann, L., Wiig, Ø., Marques-Bonet, T., Hansen, A. J. & Gilbert, M. T. P., 2020, In: Science (New York, N.Y.). 368, 6498, p. 1495-1499 5 p.

  Research output: Contribution to journal › Journal article › Research › peer-review

  Open Access
  64 Citations (Scopus)

• Genomes of Pleistocene Siberian Wolves Uncover Multiple Extinct Wolf Lineages

  Ramos-Madrigal, J., Sinding, M-H. S., Carøe, C., Mak, S. S. T., Niemann, J., Samaniego Castruita, J. A., Fedorov, S., Kandyba, A., Germonpré, M., Bocherens, H., Feuerborn, T. R., Pitulko, V. V., Pavlova, E. Y., Nikolskiy, P. A., Kasparov, A. K., Ivanova, V. V., Larson, G., Frantz, L. A. F., Willerslev, E., Meldgaard, M. & 7 others, Petersen, B., Sicheritz-Ponten, T., Bachmann, L., Wiig, Ø., Hansen, A. J., Gilbert, M. T. P. & Gopalakrishnan, S., 2020, In: Current biology : CB. 31, p. 198-206

  Research output: Contribution to journal › Journal article › Research › peer-review

  Open Access

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  25 Citations (Scopus)

  37 Downloads (Pure)

• Genomic Adaptations and Evolutionary History of the Extinct Scimitar-Toothed Cat, Homotherium latidens

  Barnett, R., Westbury, M. V., Sandoval-Velasco, M., Vieira, F. G., Jeon, S., Zazula, G., Martin, M. D., Ho, S. Y. W., Mather, N., Gopalakrishnan, S., Ramos-Madrigal, J., de Manuel, M., Zepeda-Mendoza, M. L., Antunes, A., Baez, A. C., De Cahsan, B., Larson, G., O’Brien, S. J., Eizirik, E., Johnson, W. E. & 11 others, Koepfli, K-P., Wilting, A., Fickel, J., Dalén, L., Lorenzen, E. D., Marques-Bonet, T., Hansen, A. J., Zhang, G., Bhak, J., Yamaguchi, N. & Gilbert, M. T. P., 2020, In: Current Biology. 30, p. 5018-5025

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  37 Citations (Scopus)

  65 Downloads (Pure)

• Genomic insights into the early peopling of the Caribbean

  Nägele, K., Posth, C., Iraeta Orbegozo, M., de Armas, Y. C., Hernandez Godoy, S. T., Herrera, U. M. G., Nieves-Colon, M. A., Sandoval-Velasco, M., Mylopotamitaki, D., Radzeviciute, R., Laffoon, J., Pestle, W. J., Ramos-Madrigal, J., Lamnidis, T. C., Schaffer, W. C., Carr, R. S., Day, J. S., Arredondo Antunez, C., Rangel Rivero, A., Martinez-Fuentes, A. J. & 9 others, Crespo-Torres, E., Roksandic, I., Stone, A. C., Lalueza-Fox, C., Hoogland, M., Roksandic, M., Hofman, C. L., Krause, J. & Schroeder, H., 2020, In: Science. 369, 6502, p. 456-460

  Research output: Contribution to journal › Journal article › Research › peer-review

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  45 Citations (Scopus)

• Near-Random Distribution of Chromosome-Derived Circular DNA in the Condensed Genome of Pigeons and the Larger, More Repeat-Rich Human Genome

  Møller, H. D., Ramos-Madrigal, J., Prada-Luengo, I., Gilbert, M. T. P. & Regenberg, B., 2020, In: Genome Biology and Evolution. 12, 2, p. 3762-3777 16 p.

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  Open Access

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  47 Citations (Scopus)

  102 Downloads (Pure)

• The dental proteome of Homo antecessor: {with Author Correction]

  Welker, F., Ramos-Madrigal, J., Gutenbrunner, P., Mackie, M., Tiwary, S., Rakownikow Jersie-Christensen, R., Chiva, C., Dickinson, M. R., Kuhlwilm, M., de Manuel, M., Gelabert, P., Martinón-Torres, M., Margvelashvili, A., Arsuaga, J. L., Carbonell, E., Marques-Bonet, T., Penkman, K., Sabidó, E., Cox, J., Olsen, J. V. & 6 others, Lordkipanidze, D., Racimo, F., Lalueza-Fox, C., Bermúdez de Castro, J. M., Willerslev, E. & Cappellini, E., Apr 2020, In: Nature. 580, 7802, p. 235-238 4 p.

  Research output: Contribution to journal › Journal article › Research › peer-review

  Open Access
  102 Citations (Scopus)

• Tracking the history of grapevine cultivation in Georgia by combining geometric morphometrics and ancient DNA

  Bouby, L., Wales, N., Jalabadze, M., Rusishvili, N., Bonhomme, V., Ramos-Madrigal, J., Evin, A., Ivorra, S., Lacombe, T., Pagnoux, C., Boaretto, E., Gilbert, M. T. P., Bacilieri, R., Lordkipanidze, D. & Maghradze, D., 2020, In: Vegetation History and Archaeobotany. 30, p. 63-76 14 p.

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  37 Citations (Scopus)

  20 Downloads (Pure)
• 2019

  Ancient DNA analysis of a nineteenth century tobacco pipe from a Maryland slave quarter

  Schablitsky, J. M., Witt, K. E., Madrigal, J. R., Ellegaard, M. R., Malhi, R. S. & Schroeder, H., 2019, In: Journal of Archaeological Science. 105, p. 11-18 8 p.

  Research output: Contribution to journal › Journal article › Research › peer-review
  18 Citations (Scopus)

• Early Pleistocene enamel proteome from Dmanisi resolves Stephanorhinus phylogeny

  Cappellini, E., Welker, F., Pandolfi, L., Ramos-Madrigal, J., Samodova, D., Rüther, P. L., Fotakis, A. K., Lyon, D., Moreno-Mayar, J. V., Bukhsianidze, M., Rakownikow Jersie-Christensen, R., Mackie, M., Ginolhac, A., Ferring, R., Tappen, M., Palkopoulou, E., Dickinson, M. R., Stafford, T. W., Chan, Y. L., Götherström, A. & 23 others, Nathan, S. K. S. S., Heintzman, P. D., Kapp, J. D., Kirillova, I., Moodley, Y., Agusti, J., Kahlke, R. D., Kiladze, G., Martínez-Navarro, B., Liu, S., Sandoval Velasco, M., Sinding, M. H. S., Kelstrup, C. D., Allentoft, M. E., Orlando, L., Penkman, K., Shapiro, B., Rook, L., Dalén, L., Gilbert, M. T. P., Olsen, J. V., Lordkipanidze, D. & Willerslev, E., 2019, In: Nature. 574, 7776, p. 103-107

  Research output: Contribution to journal › Journal article › Research › peer-review

  Open Access
  122 Citations (Scopus)

• Enamel proteome shows that Gigantopithecus was an early diverging pongine

  Welker, F., Ramos-Madrigal, J., Kuhlwilm, M., Liao, W., Gutenbrunner, P., de Manuel, M., Samodova, D., Mackie, M., Allentoft, M. E., Bacon, A-M., Collins, M. J., Cox, J., Lalueza-Fox, C., Olsen, J. V., Demeter, F., Wang, W., Marques-Bonet, T. & Cappellini, E., 2019, In: Nature. 576, p. 262-265

  Research output: Contribution to journal › Journal article › Research › peer-review

  Open Access
  87 Citations (Scopus)

• Palaeogenomic insights into the origins of French grapevine diversity

  Ramos-Madrigal, J., Runge, A. K. W., Bouby, L., Lacombe, T., Samaniego Castruita, J. A., Adam-Blondon, A-F., Figueiral, I., Hallavant, C., Schaal, C., Töpfer, R., Petersen, B., Sicheritz-Pontén, T., This, P., Bacilieri, R., Gilbert, M. T. P. & Wales, N., 2019, In: Nature Plants. 5, 6, p. 595-603 9 p.

  Research output: Contribution to journal › Journal article › Research › peer-review

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  90 Citations (Scopus)

  54 Downloads (Pure)

• Palaeoproteomic analysis of Early Pleistocene Gigantopithecus blacki

  Welker, F., Ramos-Madrigal, J., Wang, W., Kuhlwilm, M., Montero, M. D. M., Demeter, F., Lalueza-Fox, C., Marques-Bonet, T., Olsen, J. V. & Cappellini, E., Mar 2019, In: American Journal of Physical Anthropology. 168, suppl. 68, p. 265-266

  Research output: Contribution to journal › Conference abstract in journal › Research › peer-review

  Open Access

• The efficacy of whole human genome capture on ancient dental calculus and dentin

  Ziesemer, K. A., Ramos-Madrigal, J., Mann, A. E., Brandt, B. W., Sankaranarayanan, K., Ozga, A. T., Hoogland, M., Hofman, C. A., Salazar-Garcia, D. C., Frohlich, B., Milner, G. R., Stone, A. C., Aldenderfer, M., Lewis, C. M., Hofman, C. L., Warinner, C. & Schroeder, H., 2019, In: American Journal of Physical Anthropology. 168, 3, p. 496-509

  Research output: Contribution to journal › Journal article › Research › peer-review

  Open Access

  File
  26 Citations (Scopus)

  328 Downloads (Pure)

• The genetic origins of Saint Helena’s liberated Africans

  Sandoval-Velasco, M., Jagadeesan, A., Ávila-Arcos, M. C., Gopalakrishnan, S., Ramos Madrigal, J., Moreno-Mayar, J. V., Renaud, G., Cruz-Dávalos, D. I., Johannesdóttir, E., Watson, J., Robson-Brown, K., Pearson, A., Helgason, A., Gilbert, M. T. P. & Schroeder, H., 2019, bioRxiv, 16 p.

  Research output: Working paper › Preprint › Research

  File
  4 Downloads (Pure)
• 2018

  Ancient DNA Analysis of Nineteenth Century Pipe Stems Recovered from a Maryland Slave Quarter

  Witt, K. E., Schablitsky, J. M., Madrigal, J. R., Ellegaard, M. R., Schroeder, H. & Malhi, R. S., 2018, p. 303-304. 2 p.

  Research output: Contribution to conference › Conference abstract for conference › Research

• Ancient Population Genomics of Domesticated Plant Species

  Ramos Madrigal, J., 2018, Natural History Museum of Denmark, Faculty of Science, University of Copenhagen.

  Research output: Book/Report › Ph.D. thesis › Research

  File

• Interspecific Gene Flow Shaped the Evolution of the Genus Canis

  Gopalakrishnan, S., Sinding, M. H. S., Ramos-Madrigal, J., Niemann, J., Samaniego Castruita, J. A., Vieira, F. G., Carøe, C., Montero, M. D. M., Kuderna, L., Serres, A., González-Basallote, V. M., Liu, Y. H., Wang, G. D., Marques-Bonet, T., Mirarab, S., Fernandes, C., Gaubert, P., Koepfli, K. P., Budd, J., Rueness, E. K. & 7 others, Heide-Jørgensen, M. P., Petersen, B., Sicheritz-Ponten, T., Bachmann, L., Wiig, Ø., Hansen, A. J. & Gilbert, M. T. P., 2018, In: Current Biology. 28, 21, p. 3441-3449

  Research output: Contribution to journal › Journal article › Research › peer-review

  Open Access

  File
  98 Citations (Scopus)

  260 Downloads (Pure)

• Multiproxy evidence highlights a complex evolutionary legacy of maize in South America

  Kistler, L., Maezumi, S. Y., Gregorio De Souza, J., Przelomska, N. A. S., Malaquias Costa, F., Smith, O., Loiselle, H., Ramos-madrigal, J., Wales, N., Ribeiro, E. R., Morrison, R. R., Grimaldo, C., Prous, A. P., Arriaza, B., Gilbert, M. T. P., De Oliveira Freitas, F. & Allaby, R. G., 14 Dec 2018, In: Science. 362, 6420, p. 1309-1313

  Research output: Contribution to journal › Journal article › Research › peer-review
  157 Citations (Scopus)
• 2017

  An expanded mammal mitogenome dataset from Southeast Asia

  Mohd Salleh, F. B., Ramos Madrigal, J., Peñaloza, F., Liu, S., Sinding, M. H. S., Patel, R. P., Martins, R., Lenz, D., Fickel, J., Roos, C., Shamsir, M. S., Azman, M. S., Lim, B. K., Rossiter, S. J., Wilting, A. & Gilbert, T., Aug 2017, In: GigaScience. 6, 8, p. 1–8 8 p.

  Research output: Contribution to journal › Journal article › Research › peer-review

  Open Access

  File
  38 Citations (Scopus)

  187 Downloads (Pure)

• Whole human genome enrichment on dental calculus

  Ziesemer, K. A., Madrigal, J. R., Mann, A. E., Sankaranarayanan, K., Warinner, C., Hofman, C. & Schroeder, H., 2017, In: American Journal of Physical Anthropology. 162, Supplement S64, p. 422 1 p.

  Research output: Contribution to journal › Conference abstract in journal › Research
• 2016

  Genome sequence of a 5,310-year-old maize cob provides insights into the early stages of maize domestication

  Ramos Madrigal, J., Smith, B. D., Moreno Mayar, J. V., Gopalakrishnan, S., Ross-Ibarra, J., Gilbert, T. & Wales, N., 2016, In: Current Biology. 26, 23, p. 3195-3201 7 p.

  Research output: Contribution to journal › Journal article › Research › peer-review
  102 Citations (Scopus)

• Next-generation biology: sequencing and data analysis approaches for non-model organisms

  Rodrigues da Fonseca, R. A., Albrechtsen, A., Themudo, G. E. C., Ramos Madrigal, J., Sibbesen, J. A., Sørensen, L. M., Zepeda Mendoza, M. L., Campos, P., Heller, R. & Pereira, R., 2016, In: Marine Genomics. 30, p. 3-13

  Research output: Contribution to journal › Journal article › Research › peer-review

  Open Access

  File
  125 Citations (Scopus)

  363 Downloads (Pure)

• The limits and potential of paleogenomic techniques for reconstructing grapevine domestication

  Wales, N., Ramos Madrigal, J., Cappellini, E., Baez, A. C., Samaniego Castruita, J. A., Romero-Navarro, J. A., Carøe, C., Avila Arcos, M. D. C., Peñaloza, F., Moreno Mayar, J. V., Gasparyan, B., Zardaryan, D., Bagoyan, T., Smith, A., Pinhasi, R., Bosi, G., Fiorentino, G., Grasso, A. M., Celant, A., Bar-Oz, G. & 7 others, Tepper, Y., Hall, A., Scalabrin, S., Miculan, M., Morgante, M., Di Gaspero, G. & Gilbert, T., Aug 2016, In: Journal of Archaeological Science. 72, p. 57-70 14 p.

  Research output: Contribution to journal › Journal article › Research › peer-review
  43 Citations (Scopus)
• 2015

  New insights on single-stranded versus double-stranded DNA library preparation for ancient DNA

  Wales, N., Carøe, C., Sandoval Velasco, M., Gamba, C., Barnett, R., Samaniego Castruita, J. A., Ramos Madrigal, J., Orlando, L. A. A. & Gilbert, M. T. P., 2015, In: BioTechniques. 59, 6, p. 368-371 4 p.

  Research output: Contribution to journal › Letter › Research › peer-review
  35 Citations (Scopus)