Karsten Kristiansen

Research output

Research output per year 1972 2003 2010 2011 2012 2013 2014 2015 2016 2017 2018 2019 2020 2021 2022 2023 2024 2024

• 72414 Citations
• 455 Journal article
• 7 Review
• 6 Letter
• 4 Book chapter
• 12 More
  • 4 Comment/debate
  • 4 Other contribution
  • 3 Article in proceedings
  • 1 Conference abstract for conference

Research output per year

Research output per year

Search results

• 2024

  Altitude-dependent agro-ecologies impact the microbiome diversity of scavenging indigenous chicken in Ethiopia

  Glendinning, L., Jia, X., Kebede, A., Oyola, S. O., Park, J. E., Park, W., Assiri, A., Holm, J. B., Kristiansen, K., Han, J. & Hanotte, O., 2024, In: Microbiome. 12, 1, 21 p., 138.

  Research output: Contribution to journal › Journal article › Research › peer-review

  Open Access

  File
  3 Downloads (Pure)

• A spatiotemporal atlas of mouse liver homeostasis and regeneration

  Xu, J., Guo, P., Hao, S., Shangguan, S., Shi, Q., Volpe, G., Huang, K., Zuo, J., An, J., Yuan, Y., Cheng, M., Deng, Q., Zhang, X., Lai, G., Nan, H., Wu, B., Shentu, X., Wu, L., Wei, X., Jiang, Y. & 38 others, Huang, X., Pan, F., Song, Y., Li, R., Wang, Z., Liu, C., Liu, S., Li, Y., Yang, T., Xu, Z., Du, W., Li, L., Ahmed, T., You, K., Dai, Z., Li, L., Qin, B., Li, Y., Lai, L., Qin, D., Chen, J., Fan, R., Li, Y., Hou, J., Ott, M., Sharma, A. D., Cantz, T., Schambach, A., Kristiansen, K., Hutchins, A. P., Göttgens, B., Maxwell, P. H., Hui, L., Xu, X., Liu, L., Chen, A., Lai, Y. & Esteban, M. A., 2024, In: Nature Genetics. 56, p. 953-969 17 p.

  Research output: Contribution to journal › Journal article › Research › peer-review
  2 Citations (Scopus)

• Comparison of the DNBSEQ platform and Illumina HiSeq 2000 for bacterial genome assembly

  Hu, T., Chen, J., Lin, X., He, W., Liang, H., Wang, M., Li, W., Wu, Z., Han, M., Jin, X., Kristiansen, K., Xiao, L. & Zou, Y., 2024, In: Scientific Reports. 14, 1, 9 p., 1292.

  Research output: Contribution to journal › Journal article › Research › peer-review

  Open Access

  File
  2 Citations (Scopus)

  20 Downloads (Pure)

• Datasets of fungal diversity and pseudo-chromosomal genomes of mangrove rhizosphere soil in China

  Chen, J., Peng, L., Zhou, C., Li, L., Ge, Q., Shi, C., Guo, W., Guo, T., Jiang, L., Zhang, Z., Fan, G., Zhang, W., Kristiansen, K. & Jia, Y., 2024, In: Scientific Data. 11, 1, 11 p., 901.

  Research output: Contribution to journal › Journal article › Research › peer-review

  Open Access

  File
  2 Downloads (Pure)

• Deciphering unique and shared interactions between the human gut microbiota and oral antidiabetic drugs

  Ren, H., Shi, Z., Yang, F., Wang, S., Yuan, F., Li, T., Li, M., Zhu, J., Li, J., Wu, K., Zhang, Y., Ning, G., Kristiansen, K., Wang, W., Gu, Y. & Zhong, H., 2024, In: iMeta. 3, 2, 9 p., e179.

  Research output: Contribution to journal › Comment/debate › Research › peer-review

  Open Access

  File
  1 Citation (Scopus)

  6 Downloads (Pure)

• Dynamics of inflammation-associated plasma proteins following faecal microbiota transplantation in patients with psoriatic arthritis and healthy controls: exploratory findings from the FLORA trial [Inkl. Correction]

  Kragsnaes, M. S., Jensen, J. R. B., Nilsson, A. C., Malik, M. I., Munk, H. L., Pedersen, J. K., Horn, H. C., Kruhøffer, M., Kristiansen, K., Mullish, B. H., Marchesi, J. R., Kjeldsen, J., Röttger, R. & Ellingsen, T., 2024, In: RMD Open. 10, 1, 13 p., e003750.

  Research output: Contribution to journal › Journal article › Research › peer-review

  Open Access

  File
  2 Citations (Scopus)

  10 Downloads (Pure)

• Early life factors and oral microbial signatures define the risk of caries in a Swedish cohort of preschool children

  Eriksen, C., Boustedt, K., Sonne, S. B., Dahlgren, J., Kristiansen, K., Twetman, S., Brix, S. & Roswall, J., 2024, In: Scientific Reports. 14, 1, 13 p., 8463.

  Research output: Contribution to journal › Journal article › Research › peer-review

  Open Access

  File
  8 Downloads (Pure)

• Global marine microbial diversity and its potential in bioprospecting

  Chen, J., Jia, Y., Sun, Y., Liu, K., Zhou, C., Liu, C., Li, D., Liu, G., Zhang, C., Yang, T., Huang, L., Zhuang, Y., Wang, D., Xu, D., Zhong, Q., Guo, Y., Li, A., Seim, I., Jiang, L., Wang, L. & 32 others, Lee, S. M. Y., Liu, Y., Wang, D., Zhang, G., Liu, S., Wei, X., Yue, Z., Zheng, S., Shen, X., Wang, S., Qi, C., Chen, J., Ye, C., Zhao, F., Wang, J., Fan, J., Li, B., Sun, J., Jia, X., Xia, Z., Zhang, H., Liu, J., Zheng, Y., Liu, X., Wang, J., Yang, H., Kristiansen, K., Xu, X., Mock, T., Li, S., Zhang, W. & Fan, G., 2024, In: Nature. 633, 8029, p. 371-379 9 p.

  Research output: Contribution to journal › Journal article › Research › peer-review

  Open Access

  File
  1 Citation (Scopus)

• Gut microbiota signatures in inflammatory bowel disease

  Vestergaard, M. V., Allin, K. H., Eriksen, C., Zakerska-Banaszak, O., Arasaradnam, R. P., Alam, M. T., Kristiansen, K., Brix, S. & Jess, T., 2024, In: United European Gastroenterology Journal. 12, 1, p. 22-33 12 p.

  Research output: Contribution to journal › Journal article › Research › peer-review

  Open Access

  File
  9 Citations (Scopus)

  63 Downloads (Pure)

• Host-gut microbiota interactions shape parasite infections in farmed Atlantic salmon

  Brealey, J. C., Kodama, M., Rasmussen, J. A., Hansen, S. B., Santos-Bay, L., Lecaudey, L. A., Hansen, M., Fjære, E., Myrmel, L. S., Madsen, L., Bernhard, A., Sveier, H., Kristiansen, K., Gilbert, M. T. P., Martin, M. D. & Limborg, M. T., 2024, In: mSystems. 9, 2, 29 p., e01043-23.

  Research output: Contribution to journal › Journal article › Research › peer-review

  Open Access

  File
  3 Citations (Scopus)

  20 Downloads (Pure)

• Insights into the assembly of the neovaginal microbiota in Mayer-Rokitansky-Küster-Hauser (MRKH) syndrome patients

  Chen, N., Hao, L., Zhang, Z., Qin, C., Jie, Z., Pan, H., Duan, J., Huang, X., Zhang, Y., Gao, H., Lu, R., Sun, T., Yang, H., Shi, J., Liang, M., Guo, J., Gao, Q., Zhao, X., Dou, Z., Xiao, L. & 10 others, Zhang, S., Jin, X., Xu, X., Yang, H., Wang, J., Jia, H., Zhang, T., Kristiansen, K., Chen, C. & Zhu, L., 2024, In: Nature Communications. 15, 1, 15 p., 7808.

  Research output: Contribution to journal › Journal article › Research › peer-review

  Open Access

  File
  3 Downloads (Pure)

• Intake of different types of seafood and meat and risk of type 2 diabetes in women: a prospective study supported by a dietary intervention in mice

  Myrmel, L. S., Øyen, J., Brantsæter, A. L., Fjære, E., Haugvaldstad, K., Birkeland, K. I., Nygård, O., Kristiansen, K., Egeland, G. M. & Madsen, L., 2024, In: Scientific Reports. 14, 1, 14 p., 8950.

  Research output: Contribution to journal › Journal article › Research › peer-review

  Open Access

  File
  6 Downloads (Pure)

• Isolation of potentially novel species expands the genomic and functional diversity of Lachnospiraceae

  Lin, X., Hu, T., Wu, Z., Li, L., Wang, Y., Wen, D., Liu, X., Li, W., Liang, H., Jin, X., Xu, X., Wang, J., Yang, H., Kristiansen, K., Xiao, L. & Zou, Y., 2024, In: iMeta. 3, 2, 18 p., e174.

  Research output: Contribution to journal › Journal article › Research › peer-review

  Open Access

  File
  2 Citations (Scopus)

  31 Downloads (Pure)

• Large-scale genome sequencing of giant pandas improves the understanding of population structure and future conservation initiatives

  Lan, T., Yang, S., Li, H., Zhang, Y., Li, R., Sahu, S. K., Deng, W., Liu, B., Shi, M., Wang, S., Du, H., Huang, X., Lu, H., Liu, S., Deng, T., Chen, J., Wang, Q., Han, L., Zhou, Y., Li, Q. & 5 others, Li, D., Kristiansen, K., Wan, Q. H., Liu, H. & Fang, S. G., 2024, In: Proceedings of the National Academy of Sciences of the United States of America. 121, 36, 12 p., e2406343121.

  Research output: Contribution to journal › Journal article › Research › peer-review

  Open Access

  File

• Microbial-derived imidazole propionate links the heart failure-associated microbiome alterations to disease severity

  Raju, S. C., Molinaro, A., Awoyemi, A., Jørgensen, S. F., Braadland, P. R., Nendl, A., Seljeflot, I., Ueland, P. M., McCann, A., Aukrust, P., Vestad, B., Mayerhofer, C., Broch, K., Gullestad, L., Lappegård, K. T., Halvorsen, B., Kristiansen, K., Hov, J. R. & Trøseid, M., 2024, In: Genome Medicine. 16, 1, 12 p., 27.

  Research output: Contribution to journal › Journal article › Research › peer-review

  Open Access

  File
  6 Citations (Scopus)

  10 Downloads (Pure)

• Substantial viral diversity in bats and rodents from East Africa: insights into evolution, recombination, and cocirculation

  Wang, D., Yang, X., Ren, Z., Hu, B., Zhao, H., Yang, K., Shi, P., Zhang, Z., Feng, Q., Nawenja, C. V., Obanda, V., Robert, K., Nalikka, B., Waruhiu, C. N., Ochola, G. O., Onyuok, S. O., Ochieng, H., Li, B., Zhu, Y., Si, H. & 9 others, Yin, J., Kristiansen, K., Jin, X., Xu, X., Xiao, M., Agwanda, B., Ommeh, S., Li, J. & Shi, Z. L., 2024, In: Microbiome. 12, 1, 17 p., 72.

  Research output: Contribution to journal › Journal article › Research › peer-review

  Open Access

  File
  4 Downloads (Pure)

• Taxonomic composition and functional potentials of gastrointestinal microbiota in 12 wild-stranded cetaceans

  Fan, J., Kang, H., Lv, M., Zhai, Y., Jia, Y., Yang, Z., Shi, C., Zhou, C., Diao, L., Li, J., Jin, X., Liu, S., Kristiansen, K., Zhang, P., Chen, J. & Li, S., 2024, In: Frontiers in Microbiology. 15, 14 p., 1394745.

  Research output: Contribution to journal › Journal article › Research › peer-review

  Open Access

  File

• The effect of dairy products on liver fat and metabolic risk markers in males with abdominal obesity – a four-arm randomized controlled trial

  Sandby, K., Magkos, F., Chabanova, E., Petersen, E. T., Krarup, T., Bertram, H. C., Kristiansen, K. & Geiker, N. R. W., 2024, In: Clinical Nutrition. 43, 2, p. 534-542

  Research output: Contribution to journal › Journal article › Research › peer-review

  Open Access

  File
  3 Citations (Scopus)

  11 Downloads (Pure)

• The Food Sources in Western Diets Modulate Obesity Development, Insulin Sensitivity, and the Plasma and Cecal Metabolome in Mice

  Myrmel, L. S., Fjære, E., Han, M., Jensen, B. A. H., Rolle-Kampczyk, U., Danneskiold-Samsøe, N. B., Ho, Q. T., Smette, A., von Bergen, M., Xiao, L., Kristiansen, K. & Madsen, L., 2024, In: Molecular Nutrition & Food Research. 68, 16, 13 p., 2400246.

  Research output: Contribution to journal › Journal article › Research › peer-review

  Open Access

  File
  5 Downloads (Pure)
• 2023

  A catalog of bacterial reference genomes from cultivated human oral bacteria

  Li, W., Liang, H., Lin, X., Hu, T., Wu, Z., He, W., Wang, M., Zhang, J., Jie, Z., Jin, X., Xu, X., Wang, J., Yang, H., Zhang, W., Kristiansen, K., Xiao, L. & Zou, Y., 2023, In: npj Biofilms and Microbiomes. 9, 1, 13 p., 45.

  Research output: Contribution to journal › Journal article › Research › peer-review

  Open Access

  File
  4 Citations (Scopus)

  22 Downloads (Pure)

• A consortium of three-bacteria isolated from human feces inhibits formation of atherosclerotic deposits and lowers lipid levels in a mouse model

  Jie, Z., Zhu, Q., Zou, Y., Wu, Q., Qin, M., He, D., Lin, X., Tong, X., Zhang, J., Jie, Z., Luo, W., Xiao, X., Chen, S., Wu, Y., Guo, G., Zheng, S., Li, Y., Lai, W., Yang, H., Wang, J. & 6 others, Xiao, L., Chen, J., Zhang, T., Kristiansen, K., Jia, H. & Zhong, S., 2023, In: iScience. 26, 6, 22 p., 106960.

  Research output: Contribution to journal › Journal article › Research › peer-review

  Open Access

  File
  6 Citations (Scopus)

  15 Downloads (Pure)

• Age-dependent changes in the gut microbiota and serum metabolome correlate with renal function and human aging

  Sun, L., Li, Z., Hu, C., Ding, J., Zhou, Q., Pang, G., Wu, Z., Yang, R., Li, S., Li, J., Cai, J., Sun, Y., Li, R., Zhen, H., Sun, S., Zhang, J., Fang, M., Chen, Z., Lv, Y., Cao, Q. & 36 others, Sun, Y., Gong, R., Huang, Z., Duan, Y., Liu, H., Dong, J., Li, J., Ruan, J., Lu, H., He, B., Li, N., Li, T., Xue, W., Li, Y., Shen, J., Yang, F., Zhao, C., Liang, Q., Zhang, M., Chen, C., Gong, H., Hou, Y., Wang, J., Zhang, Y., Yang, H., Zhu, S., Xiao, L., Jin, Z., Guo, H., Zhao, P., Brix, S., Xu, X., Jia, H., Kristiansen, K., Yang, Z. & Nie, C., 2023, In: Aging Cell. 22, 12, 20 p., e14028.

  Research output: Contribution to journal › Journal article › Research › peer-review

  Open Access

  File
  5 Citations (Scopus)

  22 Downloads (Pure)

• A Gluten-Free Diet during Pregnancy and Early Life Increases Short Chain Fatty Acid-Producing Bacteria and Regulatory T Cells in Prediabetic NOD Mice

  Johansen, V. B. I., Færø, D., Buschard, K., Kristiansen, K., Pociot, F., Kiilerich, P., Josefsen, K., Haupt-jorgensen, M. & Antvorskov, J. C., 2023, In: Cells. 12, 12, 15 p., 1567.

  Research output: Contribution to journal › Journal article › Research › peer-review

  Open Access

  File
  1 Citation (Scopus)

  15 Downloads (Pure)

• Co-diversification of an intestinal Mycoplasma and its salmonid host

  Rasmussen, J. A., Kiilerich, P., Madhun, A. S., Waagbø, R., Lock, E. J. R., Madsen, L., Gilbert, M. T. P., Kristiansen, K. & Limborg, M. T., 2023, In: ISME Journal. 17, 5, p. 682-692 11 p.

  Research output: Contribution to journal › Journal article › Research › peer-review

  Open Access

  File
  21 Citations (Scopus)

  29 Downloads (Pure)

• Cold-stimulated brown adipose tissue activation is related to changes in serum metabolites relevant to NAD⁺ metabolism in humans

  U-Din, M., de Mello, V. D., Tuomainen, M., Raiko, J., Niemi, T., Fromme, T., Klåvus, A., Gautier, N., Haimilahti, K., Lehtonen, M., Kristiansen, K., Newman, J. W., Pietiläinen, K. H., Pihlajamäki, J., Amri, E. Z., Klingenspor, M., Nuutila, P., Pirinen, E., Hanhineva, K. & Virtanen, K. A., 26 Sep 2023, In: Cell Reports. 42, 9, 23 p., 113131.

  Research output: Contribution to journal › Journal article › Research › peer-review

  Open Access

  File
  3 Citations (Scopus)

  17 Downloads (Pure)

• Epigenetic Regulation of Driver Genes in Testicular Tumorigenesis

  von Eyben, F. E., Kristiansen, K., Kapp, D. S., Hu, R., Preda, O. & Nogales, F. F., 2023, In: International Journal of Molecular Sciences. 24, 4, 28 p., 4148.

  Research output: Contribution to journal › Review › Research › peer-review

  Open Access

  File
  4 Citations (Scopus)

  14 Downloads (Pure)

• Evaluation of the Impact of BaP Exposure on the Gut Microbiota and Allergic Responses in an OVA-Sensitized Mouse Model

  Du, B., Xiao, X., Wang, H., Li, W., Xia, Z., Yang, P., Huang, S. K., Yuan, R., Liu, J., Han, M., Zou, Y., Zhu, J., He, D., Lyu, J., Jin, X., Xu, X., Wang, J., Yang, H., Xiao, L., Liu, X. & 1 others, Kristiansen, K., 2023, In: Environmental Health Perspectives. 131, 6, 15 p.

  Research output: Contribution to journal › Journal article › Research › peer-review

  Open Access

  File
  3 Citations (Scopus)

  18 Downloads (Pure)

• Genome sequence and genomic analysis of liver abscess caused by hypervirulent Klebsiella pneumoniae

  Pei, N., Liu, X., Jian, Z., Yan, Q., Liu, Q., Kristiansen, K., Li, J. & Liu, W., 2023, In: 3 Biotech. 13, 3, 7 p., 76.

  Research output: Contribution to journal › Journal article › Research › peer-review

  Open Access

  File
  1 Citation (Scopus)

  16 Downloads (Pure)

• High-resolution single-molecule long-fragment rRNA gene amplicon sequencing of bacterial and eukaryotic microbial communities

  Fang, C., Sun, X., Fan, F., Zhang, X., Wang, O., Zheng, H., Peng, Z., Luo, X., Chen, A., Zhang, W., Drmanac, R., Peters, B. A., Song, Z. & Kristiansen, K., 2023, In: Cell Reports Methods. 3, 3, 16 p., 100437.

  Research output: Contribution to journal › Journal article › Research › peer-review

  Open Access

  File
  2 Citations (Scopus)

  19 Downloads (Pure)

• IgG and IgM cooperate in coating of intestinal bacteria in IgA deficiency

  Eriksen, C., Moll, J. M., Myers, P. N., Pinto, A. R. A., Danneskiold-Samsøe, N. B., Dehli, R. I., Rosholm, L. B., Dalgaard, M. D., Penders, J., Jonkers, D. M., Pan-Hammarström, Q., Hammarström, L., Kristiansen, K. & Brix, S., 2023, In: Nature Communications. 14, 1, 12 p., 8124.

  Research output: Contribution to journal › Journal article › Research › peer-review

  Open Access

  File
  2 Citations (Scopus)

  7 Downloads (Pure)

• Integrative genetic and single cell RNA sequencing analysis provides new clues to the amyotrophic lateral sclerosis neurodegeneration

  Liu, H., Guan, L., Deng, M., Bolund, L., Kristiansen, K., Zhang, J., Luo, Y. & Zhang, Z., 2023, In: Frontiers in Neuroscience. 17, 10 p., 1116087.

  Research output: Contribution to journal › Journal article › Research › peer-review

  Open Access

  File
  4 Citations (Scopus)

  15 Downloads (Pure)

• Intermittent fasting modulates the intestinal microbiota and improves obesity and host energy metabolism

  Hu, X., Xia, K., Dai, M., Han, X., Yuan, P., Liu, J., Liu, S., Jia, F., Chen, J., Jiang, F., Yu, J., Yang, H., Wang, J., Xu, X., Jin, X., Kristiansen, K., Xiao, L., Chen, W., Han, M. & Duan, S., 2023, In: npj Biofilms and Microbiomes. 9, 1, 9 p., 19.

  Research output: Contribution to journal › Journal article › Research › peer-review

  Open Access

  File
  20 Citations (Scopus)

  26 Downloads (Pure)

• Metabolic effects of diet containing blue mussel (Mytilus edulis) and blue mussel-fed salmon in a mouse model of obesity

  Azad, A. M., Bernhard, A., Shen, A., Myrmel, L. S., Lundebye, A-K., Lecaudey, L. A., Fjære, E., Tri Ho, Q., Sveier, H., Kristiansen, K., Limborg, M. T. & Madsen, L., 2023, In: Food Research International. 169, 11 p., 112927.

  Research output: Contribution to journal › Journal article › Research › peer-review

  Open Access

  File
  23 Downloads (Pure)

• Oral administration of helminth fluid modulates distinct tuft cell and immune-metabolic cues linked to reduced body fat

  Andersen, D., Moll, J. M., Arora, P., Danneskiold-Samsøe, N. B., Sonne, S. B., Workman, C. T., Williams, A. R., Kristiansen, K. & Brix, S., 2023, In: Parasite Immunology. 45, 7, 12 p., e12998.

  Research output: Contribution to journal › Journal article › Research › peer-review

  Open Access

  File
  14 Downloads (Pure)

• Response to: "Correspondence on "Safety and efficacy of faecal microbiota transplantation for active peripheral psoriatic arthritis: An exploratory randomised placebo-controlled trial'' by McGonagle et al

  Kragsnaes, M. S., Kjeldsen, J., Horn, H. C., Munk, H. L., Pedersen, J. K., Just, S. A., Ahlquist, P., Davidsen, J. R., Nilsson, A. C., Röttger, R., Kruhøffer, M., Marchesi, J. R., Kristiansen, K., Christensen, R. & Ellingsen, T., 2023, In: Annals of the Rheumatic Diseases. 82, 7, 2 p., e165.

  Research output: Contribution to journal › Comment/debate › Research

  File
  3 Citations (Scopus)

• Sex differences in the oral microbiome, host traits, and their causal relationships

  Liu, X., Tong, X., Jie, Z., Zhu, J., Tian, L., Sun, Q., Ju, Y., Zou, L., Lu, H., Qiu, X., Li, Q., Liao, Y., Lian, H., Zuo, Y., Chen, X., Rao, W., Ren, Y., Wang, Y., Zi, J., Wang, R. & 11 others, Xu, X., Yang, H., Wang, J., Zong, Y., Liu, W., Hou, Y., Jin, X., Xiao, L., Kristiansen, K., Jia, H. & Zhang, T., 2023, In: iScience. 26, 1, 23 p., 105839.

  Research output: Contribution to journal › Journal article › Research › peer-review

  Open Access

  File
  15 Citations (Scopus)

  13 Downloads (Pure)

• Specific gut pathobionts escape antibody coating and are enriched during flares in patients with severe Crohn's disease

  Eriksen, C., Danneskiold-Samsøe, N. B., Moll, J. M., Myers, P. N., Bondegaard, P. W., Vejrum, S., Hansen, T. B., Rosholm, L. B., Rausch, P., Allin, K. H., Jess, T., Kristiansen, K., Penders, J., Jonkers, D. & Brix, S., 2023, In: Gut. 73, 3, p. 448-458 11 p., e330677.

  Research output: Contribution to journal › Journal article › Research › peer-review

  File

• The genomic landscape of reference genomes of cultivated human gut bacteria

  Lin, X., Hu, T., Chen, J., Liang, H., Zhou, J., Wu, Z., Ye, C., Jin, X., Xu, X., Zhang, W., Jing, X., Yang, T., Wang, J., Yang, H., Kristiansen, K., Xiao, L. & Zou, Y., 2023, In: Nature Communications. 14, 1, 11 p., 1663.

  Research output: Contribution to journal › Journal article › Research › peer-review

  Open Access

  File
  17 Citations (Scopus)

  12 Downloads (Pure)
• 2022

  A multi-omics approach unravels metagenomic and metabolic alterations of a probiotic and synbiotic additive in rainbow trout (Oncorhynchus mykiss)

  Rasmussen, J. A., Villumsen, K. R., Ernst, M., Hansen, M., Forberg, T., Gopalakrishnan, S., Gilbert, M. T. P., Bojesen, A. M., Kristiansen, K. & Limborg, M. T., 2022, In: Microbiome. 10, 19 p., 21.

  Research output: Contribution to journal › Journal article › Research › peer-review

  Open Access

  File
  44 Citations (Scopus)

  83 Downloads (Pure)

• A pilot study of assessing whole genome sequencing in newborn screening in unselected children in China

  Jian, M., Wang, X., Sui, Y., Fang, M., Feng, C., Huang, Y., Liu, C., Guo, R., Guan, Y., Gao, Y., Wang, Z., Li, S., Cheng, B., Sun, L., Cui, F., Guo, J., Zhan, Y., Zhang, G., Zheng, L., Su, F. & 14 others, Xue, W., Qian, P., Gao, S., Chen, J., Guan, L., Lu, H., Kristiansen, K., Jin, X., Chen, F., Zhao, Y., Hammarström, L., Jiang, X., Liu, J. & Gao, Y., 2022, In: Clinical and Translational Medicine. 12, 6, 12 p., e843.

  Research output: Contribution to journal › Comment/debate › Research › peer-review

  Open Access

  File
  27 Downloads (Pure)

• Casein and red meat proteins differentially affect the composition of the gut microbiota in weaning rats

  Zhao, F., Wang, C., Song, S., Fang, C., Zhou, G., Li, C. & Kristiansen, K., 2022, In: Food Chemistry. 397, 11 p., 133769.

  Research output: Contribution to journal › Journal article › Research › peer-review

  Open Access

  File
  18 Downloads (Pure)

• Chord: an ensemble machine learning algorithm to identify doublets in single-cell RNA sequencing data

  Xiong, K-X., Zhou, H-L., Lin, C., Yin, J-H., Kristiansen, K., Yang, H-M. & Li, G-B., 2022, In: Communications Biology . 5, 11 p., 510.

  Research output: Contribution to journal › Journal article › Research › peer-review

  Open Access

  File
  6 Citations (Scopus)

  19 Downloads (Pure)

• Chromosome-scale assembly and whole-genome sequencing of 266 giant panda roundworms provide insights into their evolution, adaptation and potential drug targets

  Han, L., Lan, T., Li, D., Li, H., Deng, L., Peng, Z., He, S., Zhou, Y., Han, R., Li, L., Lu, Y., Lu, H., Wang, Q., Yang, S., Zhu, Y., Huang, Y., Cheng, X., Yu, J., Wang, Y., Sun, H. & 8 others, Chai, H., Yang, H., Xu, X., Lisby, M., Liu, Q., Kristiansen, K., Liu, H. & Hou, Z., 2022, In: Molecular Ecology Resources. 22, 2, p. 768-785 18 p.

  Research output: Contribution to journal › Journal article › Research › peer-review

  Open Access

  File
  4 Citations (Scopus)

  25 Downloads (Pure)

• Distinct Functional Metagenomic Markers Predict the Responsiveness to Anti-PD-1 Therapy in Chinese Non-Small Cell Lung Cancer Patients

  Fang, C., Fang, W., Xu, L., Gao, F., Hou, Y., Zou, H., Ma, Y., Moll, J. M., Yang, Y., Wang, D., Huang, Y., Ren, H., Zhao, H., Qin, S., Zhong, H., Li, J., Liu, S., Yang, H., Wang, J., Brix, S. & 2 others, Kristiansen, K. & Zhang, L., 2022, In: Frontiers in Oncology. 12, 13 p., 837525.

  Research output: Contribution to journal › Journal article › Research › peer-review

  Open Access

  File
  11 Citations (Scopus)

  20 Downloads (Pure)

• Effect of gastrointestinal alterations mimicking elderly conditions on in vitro digestion of meat and soy proteins

  Wang, C., Zhao, F., Bai, Y., Li, C., Xu, X., Kristiansen, K. & Zhou, G., 2022, In: Food Chemistry. 383, 9 p., 132465.

  Research output: Contribution to journal › Journal article › Research › peer-review

  File
  23 Citations (Scopus)

  12 Downloads (Pure)

• Effects of Different Storage Temperatures on Bacterial Communities and Functional Potential in Pork Meat

  Zhao, F., Wei, Z., Zhou, G., Kristiansen, K. & Wang, C., 2022, In: Foods. 11, 15, 12 p., 2307.

  Research output: Contribution to journal › Journal article › Research › peer-review

  Open Access

  File
  22 Citations (Scopus)

  19 Downloads (Pure)

• Effects of Lifetime Exposures to Environmental Contaminants on the Adult Gut Microbiome

  Thompson, K. N., Oulhote, Y., Weihe, P., Wilkinson, J. E., Ma, S., Zhong, H., Li, J., Kristiansen, K., Huttenhower, C. & Grandjean, P., 2022, In: Environmental Science & Technology. 56, 23, p. 16985-16995 11 p.

  Research output: Contribution to journal › Journal article › Research › peer-review

  File
  11 Citations (Scopus)

• Genome-wide association study of Klebsiella pneumoniae identifies variations linked to carbapenems resistance

  Pei, N., Sun, W., He, J., Li, Y., Chen, X., Liang, T., Kristiansen, K., Liu, W. & Li, J., 2022, In: Frontiers in Microbiology. 13, 11 p., 997769.

  Research output: Contribution to journal › Journal article › Research › peer-review

  Open Access

  File
  3 Citations (Scopus)

  14 Downloads (Pure)

• Genomic and microbial factors affect the prognosis of anti-pd-1 immunotherapy in nasopharyngeal carcinoma

  Xu, L., Ma, Y., Fang, C., Peng, Z., Gao, F., Moll, J. M., Qin, S., Yu, Q., Hou, Y., Kristiansen, K., Fang, W., Brix, S. & Zhang, L., 2022, In: Frontiers in Oncology. 12, 11 p., 953884.

  Research output: Contribution to journal › Journal article › Research › peer-review

  Open Access

  File
  8 Citations (Scopus)

  15 Downloads (Pure)

• Intake of a Chicken Protein-Based or Soy Protein-Based Diet Differentially Affects Growth Performance, Absorptive Capacity, and Gut Microbiota in Young Rats

  Zhao, F., Wang, C., Song, S., Fang, C., Kristiansen, K. & Li, C., 2022, In: Molecular Nutrition and Food Research. 66, 13, 14 p., 2101124.

  Research output: Contribution to journal › Journal article › Research › peer-review

  Open Access

  File
  3 Citations (Scopus)

  18 Downloads (Pure)