Research output per year
Research output per year
- 13 results
Search results
-
2023
Design considerations for eDNA metabarcoding surveys
Perry, W. B., Pillay, K., George, P., Brennan, G., Lowe, A., Jones, L., Holman, L., Gibson, T., de Vere, N. & Creer, S., 2023, Applied Environmental Genomics. Berry, O. F., Holleley, C. E. & Jarman, S. N. (eds.). CSIRO Publishing, p. 2-13Research output: Chapter in Book/Report/Conference proceeding › Book chapter › Research › peer-review
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Perspectives and Future Developments Within Sedimentary DNA Research
Holman, L. E., Wang, Y., Sawafuji, R., Epp, L. S., Bohmann, K. & Pedersen, M. W., 2023, Tracking Environmental Change Using Lake Sediments: Sedimentary DNA. Capo, E., Barouillet, C. & Smol, J. P. (eds.). Springer, Vol. 6. p. 393-416 (Developments in Paleoenvironmental Research, Vol. 21).Research output: Chapter in Book/Report/Conference proceeding › Book chapter › Research › peer-review
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2022
Detection of community-wide impacts of bottom trawl fishing on deep-sea assemblages using environmental DNA metabarcoding
Good, E., Holman, L. E., Pusceddu, A., Russo, T., Rius, M. & Iacono, C. L., 2022, In: Marine Pollution Bulletin. 183, 14 p., 114062.Research output: Contribution to journal › Journal article › Research › peer-review
Open AccessFile15 Downloads (Pure) -
How does eDNA decay affect metabarcoding experiments?
Holman, L. E., Chng, Y. & Rius, M., 2022, In: Environmental DNA. 4, 1, p. 108-116Research output: Contribution to journal › Journal article › Research › peer-review
Open AccessFile36 Citations (Scopus)11 Downloads (Pure) -
Managing human-mediated range shifts: understanding spatial, temporal and genetic variation in marine non-native species
Holman, L. E., Parker-Nance, S., Bruyn, M. D., Creer, S., Carvalho, G. & Rius, M., 2022, In: Philosophical Transactions of the Royal Society B: Biological Sciences. 377, 1846, 10 p., 20210025.Research output: Contribution to journal › Journal article › Research › peer-review
Open AccessFile10 Citations (Scopus)12 Downloads (Pure) -
ngsLCA — A toolkit for fast and flexible lowest common ancestor inference and taxonomic profiling of metagenomic data
Wang, Y., Korneliussen, T. S., Holman, L. E., Manica, A. & Pedersen, M. W., 2022, In: Methods in Ecology and Evolution. 13, 12, p. 2699-2708 10 p.Research output: Contribution to journal › Journal article › Research › peer-review
Open AccessFile9 Citations (Scopus)33 Downloads (Pure) -
2021
Animals, protists and bacteria share marine biogeographic patterns
Holman, L. E., Bruyn, M. D., Creer, S., Carvalho, G., Robidart, J. & Rius, M., 2021, In: Nature Ecology & Evolution. 5, 6, p. 738-746Research output: Contribution to journal › Journal article › Research › peer-review
35 Citations (Scopus) -
Environmental DNA sampling protocols for the surveillance of marine non-indigenous species in Irish coastal waters
Fernandez, S., Miller, D. L., Holman, L. E., Gittenberger, A., Ardura, A., Rius, M. & Mirimin, L., 2021, In: Marine Pollution Bulletin. 172, 11 p., 112893.Research output: Contribution to journal › Journal article › Research › peer-review
14 Citations (Scopus) -
2019
Demonstration of the Use of Environmental DNA for the Non-Invasive Genotyping of a Bivalve Mollusk, the European Flat Oyster (Ostrea edulis)
Holman, L. E., Hollenbeck, C. M., Ashton, T. J. & Johnston, I. A., 2019, In: Frontiers in Genetics. 10, 7 p., 1159.Research output: Contribution to journal › Journal article › Research › peer-review
Open AccessFile5 Downloads (Pure) -
Detection of introduced and resident marine species using environmental DNA metabarcoding of sediment and water
Holman, L. E., de Bruyn, M., Creer, S., Carvalho, G., Robidart, J. & Rius, M., 2019, In: Scientific Reports. 9, 10 p., 11559.Research output: Contribution to journal › Journal article › Research › peer-review
Open AccessFile13 Downloads (Pure) -
2018
Marine Invasion Genomics: Revealing Ecological and Evolutionary Consequences of Biological Invasions
Bourne, S. D., Hudson, J., Holman, L. E. & Rius, M., 2018, Population Genomics: Marine Organisms. Oleksiak, M. F. & Rajora, O. P. (eds.). Springer, p. 363-398 (Populuation Genomics).Research output: Chapter in Book/Report/Conference proceeding › Book chapter › Research › peer-review
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Optimising the detection of marine taxonomic richness using environmental DNA metabarcoding: the effects of filter material, pore size and extraction method
Deiner, K., Lopez, J., Bourne, S., Holman, L. E., Seymour, M., Grey, E. K., Lacoursière-Roussel, A., Li, Y., Renshaw, M. A., Pfrender, M. E., Rius, M., Bernatchez, L. & Lodge, D. M., 2018, In: Metabarcoding and Metagenomics. 2, 15 p., e28963.Research output: Contribution to journal › Journal article › Research › peer-review
Open AccessFile51 Citations (Scopus)5 Downloads (Pure) -
2017
A workflow used to design low density SNP panels for parentage assignment and traceability in aquaculture species and its validation in Atlantic salmon
Holman, L. E., serrana, D. G. D. L., Onoufriou, A., Hillestad, B. & Johnston, I. A., 2017, In: Aquaculture. 476, p. 59-64Research output: Contribution to journal › Journal article › Research › peer-review
27 Citations (Scopus)