Research output per year
Research output per year
Search results
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2024
Aerobic adaptation and metabolic dynamics of Propionibacterium freudenreichii DSM 20271: insights from comparative transcriptomics and surfaceome analysis
Loivamaa, I., Sillanpää, A., Deptula, P., Chamlagain, B., Edelmann, M., Auvinen, P., Nyman, T. A., Savijoki, K., Piironen, V. & Varmanen, P., 2024, In: mSystems. 9, 10, 26 p., e00615-24.Research output: Contribution to journal › Journal article › Research › peer-review
Open AccessFile -
Draft genome sequences of 53 Lactococcus and Leuconostoc strains isolated from two undefined DL-starter cultures
Li, W., Soto-Serrano, A., Panah, F. M., Arik, G., Deptula, P., Lucena, D., Vogensen, F. K. & Krych, L., 2024, In: Microbiology resource announcements. 13, 6, 7 p., e00228-24.Research output: Contribution to journal › Journal article › Research › peer-review
Open AccessFile8 Downloads (Pure) -
Matching excellence: Oxford Nanopore Technologies' rise to parity with Pacific Biosciences in genome reconstruction of non-model bacterium with high G+C content
Soto-Serrano, A., Li, W., Panah, F. M., Hui, Y., Atienza, P., Fomenkov, A., Roberts, R. J., Deptula, P. & Krych, L., 2024, In: Microbial genomics. 10, 11, 18 p., 001316.Research output: Contribution to journal › Journal article › Research › peer-review
Open AccessFile -
Revised whole genome and DNA methylome of Mycobacterium marinum type strain ATCC 927T
Savijoki, K., Deptula, P., Roberts, R. J., Hammarén, M., Yli-Kauhaluoma, J., Varmanen, P. & Parikka, M., 2024, In: Microbiology resource announcements. 13, 4, 5 p., e0101623.Research output: Contribution to journal › Journal article › Research › peer-review
Open AccessFile5 Downloads (Pure) -
2021
Sporofaciens musculi gen. nov., sp. nov., a novel bacterium isolated from the caecum of an obese mouse
Rasmussen, T. S., Streidl, T., Hitch, T. C. A., Wortmann, E., Deptula, P., Kofoed, M. V. W., Riedel, T., Neumann-Schaal, M., Hansen, M., Nielsen, D. S., Clavel, T. & Vogensen, F. K., 2021, In: International Journal of Systematic and Evolutionary Microbiology. 71, 3, 13 p., 004673.Research output: Contribution to journal › Journal article › Research › peer-review
Open AccessFile7 Citations (Scopus)44 Downloads (Pure) -
2020
Complete genome sequences and methylome analyses of cutibacterium acnes subsp. acnes strains DSM 16379 and DSM 1897T
Deptula, P., Laine, P., Paulin, L., Auvinen, P., Roberts, R. J., Johnston, C. D. & Varmanen, P., 2020, In: Microbiology resource announcements. 9, 29, 3 p., e00705-20.Research output: Contribution to journal › Journal article › Research › peer-review
Open AccessFile3 Citations (Scopus)12 Downloads (Pure) -
Skin Microbiome in Cutaneous T-Cell Lymphoma by 16S and Whole-Genome Shotgun Sequencing
Salava, A., Deptula, P., Lyyski, A., Laine, P., Paulin, L., Väkevä, L., Ranki, A., Auvinen, P. & Lauerma, A., 2020, In: Journal of Investigative Dermatology. 140, 11, p. 2304-2308, e1-e7 12 p.Research output: Contribution to journal › Letter › Research › peer-review
Open AccessFile24 Citations (Scopus)8 Downloads (Pure) -
2019
Red-Brown Pigmentation of Acidipropionibacterium jensenii is Tied to Haemolytic Activity and cyl-Like Gene Cluster
Deptula, P., Loivamaa, I., Smolander, O. P., Laine, P., Roberts, R. J., Piironen, V., Paulin, L., Savijoki, K., Auvinen, P. & Varmanen, P., 2019, In: Microorganisms. 7, 11, 15 p., 512.Research output: Contribution to journal › Journal article › Research › peer-review
Open AccessFile8 Citations (Scopus)91 Downloads (Pure)