Roger Antony Garrett

Research output

Research output per year 1991 1997 1998 1999 2000 2004 2005 2006 2008 2009 2011 2012 2013 2014 2016 2022

• 10656 Citations
• 112 Journal article
• 10 Book chapter
• 5 Review
• 2 Report chapter
• 3 More
  • 1 Book
  • 1 Doctoral thesis
  • 1 Encyclopedia chapter

Research output per year

Research output per year

Search results

• 2022

  CRISPR-Cas systems are widespread accessory elements across bacterial and archaeal plasmids

  Pinilla-Redondo, R., Russel, J., Mayo-Muñoz, D., Shah, S. A., Garrett, R. A., Nesme, J., Madsen, J. S., Fineran, P. C. & Sørensen, S. J., 2022, In: Nucleic Acids Research. 50, 8, p. 4315-4328

  Research output: Contribution to journal › Journal article › Research › peer-review

  Open Access

  File
  42 Citations (Scopus)

  69 Downloads (Pure)
• 2020

  Archaeal Viruses and Their Interactions with CRISPR-Cas Systems

  Garrett, R. A., Shah, S. A., Martinez-Alvarez, L. & Peng, X., 2020, Biocommunication of Phages. 1 ed. Springer, p. 199-220 22 p.

  Research output: Chapter in Book/Report/Conference proceeding › Book chapter › Research › peer-review

  File

• Evolutionary classification of CRISPR-Cas systems: a burst of class 2 and derived variants

  Makarova, K. S., Wolf, Y. I., Iranzo, J., Shmakov, S. A., Alkhnbashi, O. S., Brouns, S. J. J., Charpentier, E., Cheng, D., Haft, D. H., Horvath, P., Moineau, S., Mojica, F. J. M., Scott, D., Shah, S. A., Siksnys, V., Terns, M. P., Venclovas, Č., White, M. F., Yakunin, A. F., Yan, W. & 6 others, Zhang, F., Garrett, R. A., Backofen, R., van der Oost, J., Barrangou, R. & Koonin, E. V., 2020, In: Nature Reviews. Microbiology. 18, p. 67-83

  Research output: Contribution to journal › Review › Research › peer-review

  Open Access

  File
  1459 Citations (Scopus)

  26 Downloads (Pure)

• Type IV CRISPR-Cas systems are highly diverse and involved in competition between plasmids

  Pinilla-Redondo, R., Mayo-Muñoz, D., Russel, J., Garrett, R. A., Randau, L., Sørensen, S. J. & Shah, S. A., 2020, In: Nucleic Acids Research. 48, 4, p. 2000-2012 13 p.

  Research output: Contribution to journal › Journal article › Research › peer-review

  Open Access

  File
  119 Citations (Scopus)

  192 Downloads (Pure)
• 2019

  Comprehensive search for accessory proteins encoded with archaeal and bacterial type III CRISPR-cas gene cassettes reveals 39 new cas gene families

  Shah, S. A., Alkhnbashi, O. S., Behler, J., Han, W., She, Q., Hess, W. R., Garrett, R. A. & Backofen, R., 2019, In: RNA Biology. 16, 4, p. 530-542 13 p.

  Research output: Contribution to journal › Journal article › Research › peer-review

  Open Access

  File
  64 Citations (Scopus)

  165 Downloads (Pure)

• Predicted highly derived class 1 CRISPR-Cas system in Haloarchaea containing diverged Cas5 and Cas7 homologs but no CRISPR array

  Makarova, K. S., Karamycheva, S., Shah, S. A., Vestergaard, G. A., Garrett, R. A. & Koonin, E. V., 2019, In: FEMS Microbiology Letters. 366, 7, 5 p., fnz079.

  Research output: Contribution to journal › Journal article › Research › peer-review

  Open Access
  11 Citations (Scopus)

• Stable maintenance of the rudivirus SIRV3 in a carrier state in Sulfolobus islandicus despite activation of the CRISPR-Cas immune response by a second virus SMV1

  Papathanasiou, P., Erdmann, S., Leon-Sobrino, C., Sharma, K., Urlaub, H., Garrett, R. A. & Peng, X., 2019, In: RNA Biology. 16, 4, p. 557-565

  Research output: Contribution to journal › Journal article › Research › peer-review

  Open Access
  12 Citations (Scopus)
• 2016

  Archaeal physiology: the secrets of termination

  Garrett, R. A., 2016, In: Nature Microbiology. 1, 2 p., 16159.

  Research output: Contribution to journal › Journal article › Research › peer-review
  1 Citation (Scopus)

• Characterizing leader sequences of CRISPR loci

  Alkhnbashi, O., Shah, S. A., Garrett, R. A., Saunders, S. J., Costa, F. & Backofen, R., 2016, In: Bioinformatics. 32, 17, p. i576-i585 10 p.

  Research output: Contribution to journal › Journal article › Research › peer-review
  61 Citations (Scopus)

• Diverse CRISPR-Cas responses and dramatic cellular DNA changes and cell death in pKEF9-conjugated Sulfolobus species

  Guannan, L., She, Q. & Garrett, R. A., 2016, In: Nucleic Acids Research. 44, 9, p. 4233-4242 10 p.

  Research output: Contribution to journal › Journal article › Research › peer-review

  Open Access

  File
  17 Citations (Scopus)

  161 Downloads (Pure)

• Major and minor crRNA annealing sites facilitate low stringency DNA protospacer binding prior to Type I-A CRISPR-Cas interference in Sulfolobus

  Mousaei, M., Deng, L., She, Q. & Garrett, R. A., 2016, In: R N A Biology. 13, 11, p. 1166-1173 8 p.

  Research output: Contribution to journal › Journal article › Research › peer-review
  11 Citations (Scopus)

• Repression of RNA polymerase by the archaeo-viral regulator ORF145/RIP

  Sheppard, C., Blombach, F., Belsom, A., Schulz, S., Daviter, T., Smollett, K., Mahieu, E., Erdmann, S., Tinnefeld, P., Garrett, R. A., Grohmann, D., Rappsilber, J. & Werner, F., 2016, In: Nature Communications. 7, 13 p., 13595.

  Research output: Contribution to journal › Journal article › Research › peer-review

  Open Access

  File
  18 Citations (Scopus)

  234 Downloads (Pure)

• Transcriptome changes in STSV2-infected Sulfolobus islandicus REY15A undergoing continuous CRISPR spacer acquisition

  León Sobrino, C., Kot, W. P. & Garrett, R. A., 2016, In: Molecular Microbiology. 99, 4, p. 719-728 10 p.

  Research output: Contribution to journal › Journal article › Research › peer-review

  Open Access

  File
  27 Citations (Scopus)

  235 Downloads (Pure)

• Viruses of the Archaea

  Prangishvili, D., Basta, T., Garrett, R. A. & Krupovic, M., 2016, In: eLS. 9 p.

  Research output: Contribution to journal › Review › Research › peer-review
• 2015

  An updated evolutionary classification of CRISPR-Cas systems

  Makarova, K. S., Wolf, Y. I., Alkhnbashi, O. S., Costa, F., Shah, S. A., Saunders, S. J., Barrangou, R., Brouns, S. J. J., Charpentier, E., Haft, D. H., Horvath, P., Moineau, S., Mojica, F. J. M., Terns, R. M., Terns, M. P., White, M. F., Yakunin, A. F., Garrett, R. A., van der Oost, J., Backofen, R. & 1 others, Koonin, E. V., 2015, In: Nature Reviews. Microbiology. 13, 11, p. 722-736 15 p.

  Research output: Contribution to journal › Journal article › Research › peer-review
  1901 Citations (Scopus)

• Archaeal viruses of the sulfolobales: isolation, infection, and CRISPR spacer acquisition

  Erdmann, S. & Garrett, R. A., 2015, CRISPR: methods and protocols. Lundgren, M., Charpentier, E. & Fineran, P. C. (eds.). Springer, p. 223-232 10 p. (Methods in Molecular Biology, Vol. 1311).

  Research output: Chapter in Book/Report/Conference proceeding › Book chapter › Research › peer-review
  2 Citations (Scopus)

• CRISPR-Cas adaptive immune systems of the sulfolobales: unravelling their complexity and diversity

  Garrett, R. A., Shah, S. A., Erdmann, S., Guannan, L., Mousaei, M., León Sobrino, C., Peng, W., Islin, S. R., Deng, L., Vestergaard, G., Peng, X. & She, Q., 2015, In: Life. 5, 1, p. 783-817 35 p.

  Research output: Contribution to journal › Journal article › Research › peer-review

  Open Access

  File
  42 Citations (Scopus)

  392 Downloads (Pure)

• Genomic context drives transcription of insertion sequences in the bacterial endosymbiont Wolbachia wVulC

  Cerveau, N., Gilbert, C., Liu, C., Garrett, R. A., Greve, P., Bouchon, D. & Cordaux, R., 2015, In: Gene. 564, 1, p. 81-86 6 p.

  Research output: Contribution to journal › Journal article › Research › peer-review
  1 Citation (Scopus)
• 2014

  A backward view from 16S rRNA to archaea to the universal tree of life to progenotes Reminiscences of Carl Woese

  Garrett, R. A., 2014, In: R N A Biology. 11, 3, p. 232-235 4 p.

  Research output: Contribution to journal › Review › Research › peer-review

  File
  5 Citations (Scopus)

  92 Downloads (Pure)

• Adenosine triphosphatases of thermophilic archaeal double-stranded DNA viruses

  Happonen, L. J., Erdmann, S., Garrett, R. A. & Butcher, S. J., 2014, In: Cell & Bioscience. 4, 37, p. 37-52 16 p.

  Research output: Contribution to journal › Review › Research › peer-review

  Open Access

  File
  7 Citations (Scopus)

  1143 Downloads (Pure)

• A novel single-tailed fusiform Sulfolobus virus STSV2 infecting model Sulfolobus species

  Erdmann, S., Chen, B., Huang, X., Deng, L., Liu, C., Shah, S. A., Bauer, S. L. M., León Sobrino, C., Wang, H., Wei, Y., She, Q., Garrett, R. A., Huang, L. & Lin, L., 2014, In: Extremophiles. 18, 1, p. 51-60 10 p.

  Research output: Contribution to journal › Journal article › Research › peer-review
  34 Citations (Scopus)

• CRISPR adaptive immune systems of Archaea

  Vestergaard, G. A., Garrett, R. A. & Shah, S. A., 2014, In: R N A Biology. 11, 2, p. 157-168 12 p.

  Research output: Contribution to journal › Journal article › Research › peer-review

  Open Access

  File
  113 Citations (Scopus)

  103 Downloads (Pure)

• CRISPRstrand: predicting repeat orientations to determine the crRNA-encoding strand at CRISPR loci

  Alkhnbashi, O. S., Costa, F., Shah, S. A., Garrett, R. A., Saunders, S. J. & Backofen, R., 2014, In: Bioinformatics. 30, 17, p. i489-i496 8 p.

  Research output: Contribution to journal › Journal article › Research › peer-review

  Open Access

  File
  49 Citations (Scopus)

  1382 Downloads (Pure)

• Inter-viral conflicts that exploit host CRISPR immune systems of Sulfolobus

  Erdmann, S., Le Moine Bauer, S. & Garrett, R. A., 2014, In: Molecular Microbiology. 91, 5, p. 900-917 18 p.

  Research output: Contribution to journal › Journal article › Research › peer-review

  Open Access

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  66 Citations (Scopus)

  1475 Downloads (Pure)
• 2013

  A novel interference mechanism by a type IIIB CRISPR-Cmr module in Sulfolobus

  Deng, L., Garrett, R. A., Shah, S. A., Peng, X. & She, Q., 2013, In: Molecular Microbiology. 87, 5, p. 1088-1099 12 p.

  Research output: Contribution to journal › Journal article › Research › peer-review
  203 Citations (Scopus)

• Archaeal type II toxin-antitoxins

  Shah, S. A. & Garrett, R. A., 2013, Prokaryotic toxin-antitoxins. Gerdes, K. (ed.). Springer, p. 225-238 14 p.

  Research output: Chapter in Book/Report/Conference proceeding › Book chapter › Research › peer-review

  File
  6 Citations (Scopus)

• Discovery and seminal developments in the CRISPR field

  Mojica, F. J. M. & Garrett, R. A., 2013, CRISPR-Cas Systems: RNA-mediated Adaptive Immunity in Bacteria and Archaea. Barrangou, R. & van der Oost, J. (eds.). Springer VS, p. 1-31 31 p.

  Research output: Chapter in Book/Report/Conference proceeding › Book chapter › Research › peer-review
  27 Citations (Scopus)

• Genome Sequence of a Novel Archaeal Fusellovirus Assembled from the Metagenome of a Mexican Hot Spring

  Servin-Garciduenas, L. E., Peng, X., Garrett, R. A. & Martinez-Romero, E., 2013, In: Genome Announcements. 1, p. 1-2 2 p.

  Research output: Contribution to journal › Journal article › Research › peer-review

  Open Access

  File
  10 Citations (Scopus)

  1294 Downloads (Pure)

• Genome Sequence of a Novel Archaeal Rudivirus Recovered from a Mexican Hot Spring

  Servín-Garcidueñas, L., Peng, X., Garrett, R. & Martínez-Romero, E., 2013, In: Genome Announcements. 1, 1, p. 1-2 2 p.

  Research output: Contribution to journal › Journal article › Research › peer-review

  Open Access

  File
  16 Citations (Scopus)

  1269 Downloads (Pure)

• Genome Sequence of the Acidophilic Bacterium Acidocella sp. Strain MX-AZ02

  Servín-Garcidueñas, L. E., Garrett, R. A., Amils, R. & Martínez-Romero, E., 2013, In: Genome Announcements. 1, 1, p. 1-2 2 p.

  Research output: Contribution to journal › Journal article › Research › peer-review

  Open Access

  File
  9 Citations (Scopus)

  1006 Downloads (Pure)

• Novel insights into gene regulation of the rudivirus SIRV2 infecting Sulfolobus cells

  Okutan, E., Deng, L., Mirlashari, S., Uldahl, K., Halim, M., Liu, C., Garrett, R. A., She, Q. & Peng, X., 2013, In: R N A Biology. 10, 5, p. 1-11 11 p.

  Research output: Contribution to journal › Journal article › Research › peer-review
  38 Citations (Scopus)

• Protospacer recognition motifs: Mixed identities and functional diversity

  Shah, S. A., Erdmann, S., Mojica, F. J. M. & Garrett, R. A., 2013, In: R N A Biology. 10, 5, p. 1-9 9 p.

  Research output: Contribution to journal › Journal article › Research › peer-review
  281 Citations (Scopus)

• SMV1 virus-induced CRISPR spacer acquisition from the conjugative plasmid pMGB1 in Sulfolobus solfataricus P2

  Erdmann, S., Shah, S. A. & Garrett, R. A., 2013, In: Biochemical Society Transactions. 41, 6, p. 1449-1458 10 p.

  Research output: Contribution to journal › Journal article › Research › peer-review

  Open Access

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  20 Citations (Scopus)

  1903 Downloads (Pure)

• Solution properties of the archaeal CRISPR DNA repeat-binding homeodomain protein Cbp2

  Kenchappa, C., Heiðarsson, P. O., Kragelund, B., Garrett, R. & Poulsen, F., 2013, In: Nucleic Acids Research. 41, 5, p. 3424-3435 12 p.

  Research output: Contribution to journal › Journal article › Research › peer-review

  Open Access

  File
  11 Citations (Scopus)

  2080 Downloads (Pure)
• 2012

  Archaeal viruses-novel, diverse and enigmatic

  Peng, X., Garrett, R. A. & She, Q., 2012, In: Science China Life Sciences. 55, 5, p. 422-433 12 p.

  Research output: Contribution to journal › Journal article › Research › peer-review
  23 Citations (Scopus)

• CRISPR/Cas and CRISPR/Cmr immune systems of archaea

  Shah, S. A., Vestergaard, G. A. & Garrett, R. A., 2012, Regulatory RNAs in prokaryotes. Springer, p. 163-181 19 p.

  Research output: Chapter in Book/Report/Conference proceeding › Book chapter › Research › peer-review
  8 Citations (Scopus)

• Crystal structure of ATV^ORF273, a new fold for a thermo- and acido-stable protein from the Acidianus two-tailed virus

  Felisberto-Rodrigues, C., Blangy, S., Goulet, A., Vestergaard, G. A., Cambillau, C., Garrett, R. A. & Ortiz-Lombardía, M., 2012, In: P L o S One. 7, 10, 10 p.

  Research output: Contribution to journal › Journal article › Research › peer-review

  Open Access

  File
  6 Citations (Scopus)

  773 Downloads (Pure)

• Modulation of CRISPR locus transcription by the repeat-binding protein Cbp1 in Sulfolobus

  Deng, L., Kenchappa, C. S., Peng, X., She, Q. & Garrett, R. A., 2012, In: Nucleic Acids Research. 40, 6, p. 2470-2480 11 p.

  Research output: Contribution to journal › Journal article › Research › peer-review
  60 Citations (Scopus)

• Selective and hyperactive uptake of foreign DNA by adaptive immune systems of an archaeon via two distinct mechanisms: [plus] Corrigendum

  Erdmann, S. & Garrett, R. A., 2012, In: Molecular Microbiology. 85, 6, p. 1044-1056 13 p.

  Research output: Contribution to journal › Journal article › Research › peer-review

  File
  120 Citations (Scopus)

• The expression of one ankyrin pk2 allele of the WO prophage is correlated with the Wolbachia feminizing effect in isopods

  Pichon, S., Bouchon, D., Liu, C., Chen, L. & Garrett, R. A., 2012, In: B M C Microbiology. 12, 55, 10 p.

  Research output: Contribution to journal › Journal article › Research › peer-review

  Open Access

  File
  19 Citations (Scopus)

  754 Downloads (Pure)
• 2011

  AAA ATPase p529 of Acidianus two-tailed virus ATV and host receptor recognition

  Erdmann, S., Scheele, U. & Garrett, R. A., 2011, In: Virology. 421, 1, p. 61-66 6 p.

  Research output: Contribution to journal › Journal article › Research › peer-review

  File
  15 Citations (Scopus)

• A dimeric Rep protein initiates replication of a linear archaeal virus genome: implications for the Rep mechanism and viral replication

  Oke, M., Kerou, M., Liu, H., Peng, X., Garrett, R. A., Prangishvili, D., Naismith, J. H. & White, M. F., 2011, In: Journal of Virology. 85, 2, p. 925-31 7 p.

  Research output: Contribution to journal › Journal article › Research › peer-review
  34 Citations (Scopus)

• Archaeal CRISPR-based immune systems: exchangeable functional modules

  Garrett, R. A., Vestergaard, G. A. & Shah, S. A., 2011, In: Trends in Microbiology. 19, 11, p. 549-56 8 p.

  Research output: Contribution to journal › Review › Research › peer-review
  78 Citations (Scopus)

• Chaperone role for proteins p618 and p892 in the extracellular tail development of Acidianus two-tailed virus

  Scheele, U., Erdmann, S., Ungewickell, E. J., Felisberto-Rodrigues, C., Ortiz-Lombardía, M. & Garrett, R. A., 2011, In: Journal of Virology. 85, 10, p. 4812-4821 10 p.

  Research output: Contribution to journal › Journal article › Research › peer-review
  26 Citations (Scopus)

• CRISPR/Cas and Cmr modules, mobility and evolution of adaptive immune systems

  Shah, S. A. & Garrett, R. A., 2011, In: Research in Microbiology. 162, 1, p. 27-38 12 p.

  Research output: Contribution to journal › Journal article › Research › peer-review
  77 Citations (Scopus)

• CRISPR-based immune systems of the Sulfolobales: complexity and diversity

  Garrett, R. A., Shah, S. A., Vestergaard, G. A., Deng, L., Guðbergsdóttir, S. R., Kenchappa, C. S., Erdmann, S. & She, Q., 2011, In: Biochemical Society Transactions. 39, 1, p. 51-57 7 p.

  Research output: Contribution to journal › Journal article › Research › peer-review
  52 Citations (Scopus)

• Dynamic properties of the Sulfolobus CRISPR/Cas and CRISPR/Cmr systems when challenged with vector-borne viral and plasmid genes and protospacers

  Guðbergsdóttir, S. R., Deng, L., Chen, Z., Jensen, J. V. K., Jensen, L. R., She, Q. & Garrett, R. A., 2011, In: Molecular Microbiology. 79, 1, p. 35-49 15 p.

  Research output: Contribution to journal › Journal article › Research › peer-review
  188 Citations (Scopus)

• Genome Analyses of Icelandic Strains of Sulfolobus islandicus, Model Organisms for Genetic and Virus-Host Interaction Studies

  Guo, L., Brügger, K., Liu, C., Shah, S. A., Zheng, H., Zhu, Y., Wang, S., Lillestøl, R. K., Chen, L., Frank, J., Prangishvili, D., Paulin, L., She, Q., Huang, L. & Garrett, R. A., 1 Apr 2011, In: Journal of Bacteriology. 193, 7, p. 1672-80 9 p.

  Research output: Contribution to journal › Journal article › Research › peer-review
  125 Citations (Scopus)

• Genomic analysis of Acidianus hospitalis W1 a host for studying crenarchaeal virus and plasmid life cycles

  You, X. Y., Liu, C., Wang, S. Y., Jiang, C. Y., Shah, S. A., Prangishvili, D., She, Q., Liu, S. J. & Garrett, R. A., 2011, In: Extremophiles. 15, p. 487-497 11 p.

  Research output: Contribution to journal › Journal article › Research › peer-review

  Open Access

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  35 Citations (Scopus)

  1257 Downloads (Pure)
• 2010

  Getting the best out of long-wavelength X-rays: de novo chlorine/sulfur SAD phasing of a structural protein from ATV

  Goulet, A., Vestergaard, G. A., Felisberto-Rodrigues, C., Campanacci, V., Garrett, R. A., Cambillau, C. & Ortiz-Lombardía, M., 2010, In: Acta Crystallographica. Section D: Biological Crystallography. 66, Pt 3, p. 304-308 5 p.

  Research output: Contribution to journal › Journal article › Research › peer-review
  36 Citations (Scopus)