Susanna Cirera

Search results

• 2025

  Measuring energy expenditure in Göttingen Minipigs using indirect calorimetry: validation and methodological considerations

  Bredum, S. K., Jacobsen, J., Cirera, S. & Christoffersen, B., 2025, In: Laboratory animal research. 41, 9.

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• Profiling host- and parasite-derived miRNAs associated with Strongylus vulgaris infection in horses

  Toft, K., Honoré, M. L., Ripley, N., Nielsen, M. K., Mardahl, M., Fromm, B., Hedberg-Alm, Y., Tydén, E., Nielsen, L. N., Nejsum, P., Thamsborg, S. M., Cirera, S. & Pihl, T. H., 2025, In: Veterinary Parasitology. 334, 15 p., 110379.

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• The microRNAome of Strongylus vulgaris larvae and their excretory/secretory products with identification of parasite-derived microRNAs in horse arterial tissue

  Toft, K., Honoré, M. L., Ripley, N. E., Nielsen, M. K., Fromm, B., Mardahl, M., Nielsen, L. N., Nejsum, P., Thamsborg, S. M., Cirera, S. & Pihl, T. H., 2025, In: International Journal for Parasitology. 55, 1, 45-58.

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  1 Citation (Scopus)

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• 2024

  Association of serum and fecal microRNA profiles in healthy cats and cats with gastrointestinal cancer or chronic inflammatory enteropathy

  Lyngby, J., Brogaard, L., Kristensen, A., Fredholm, M., Bjørnvad, C., Salavati Schmitz, S., Skancke, E., Morris, J., Dupont, N., Argyle, D., Sánchez, S., Spohr, A., Graarup-Hansen, K., Nielsen, L. & Cirera, S., 2024, In: Journal of Veterinary Internal Medicine. 38, 1, p. 741 1 p., ESCG-O-3.

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• High fat diet is associated with gut microbiota dysbiosis and decreased gut microbial derived metabolites related to metabolic health in young Göttingen Minipigs

  Lützhøft, D. O., Bækgård, C., Wimborne, E., Straarup, E. M., Pedersen, K. M., Swann, J. R., Pedersen, H. D., Kristensen, K., Morgills, L., Nielsen, D. S., Hansen, A. K., Bracken, M. K., Cirera, S. & Christoffersen, B. Ø., 2024, In: PLoS ONE. 19, 3, 27 p., e0298602.

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  6 Citations (Scopus)

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• Mitral valve transcriptome analysis in thirty-four age-matched Cavalier King Charles Spaniels with or without congestive heart failure caused by myxomatous mitral valve disease

  Reimann, M. J., Cremer, S., Christiansen, L., Ibragimov, E., Gao, F., Cirera, S., Fredholm, M., Olsen, L. H. & Karlskov-Mortensen, P., 2024, In: Mammalian Genome. 35, 1, p. 77-89 13 p.

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  4 Citations (Scopus)

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• 2023

  Alteration of microglial metabolism and inflammatory profile contributes to neurotoxicity in a hiPSC-derived microglia model of frontotemporal dementia 3

  Haukedal, H., Syshøj Lorenzen, S., Westi, E. W., Corsi, G., Gadekar, V. P., McQuade, A., Davtyan, H., Doncheva, N. T., Schmid, B., Chandrasekaran, A., Seemann, E. S., Cirera, S., Blurton-Jones, M., Meyer, M., Gorodkin, J., Aldana, B. & Freude, K., 2023, In: Brain, Behavior, and Immunity. 113, p. 353-373

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  2 Citations (Scopus)

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• A molecular target of oxantel in whipworms

  Hansen, T. V. A., Klærke, D. A., Cirera, S., Callø, K., Courtot, E., Grencis, R. K., Issouf, M., Martin, R., Neveu, C. & Charvet, C., 2023.

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• Association of serum and fecal microRNA profiles in cats with gastrointestinal cancer and chronic inflammatory enteropathy

  Brogaard, L., Lyngby, J. G., Kristensen, A. T., Fredholm, M., Bjørnvad, C. R., Salavati Schmitz, S., Skancke, E., Morris, J. S., Dupont, N., Argyle, D., Sánchez, A., Spohr, A., Graarup-Hansen, K., Nielsen, L. N. & Cirera, S., 2023, In: Journal of Veterinary Internal Medicine. 37, 5, p. 1738-1749

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  1 Citation (Scopus)

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• Functional and morphological renal changes in a Göttingen Minipig model of obesity-related and diabetic nephropathy

  Christoffersen, B. Ø., Kristensen, C. A., Lindgaard, R., Kirk, R. K., Viuff, B. M., Kvist, P. H., Pedersen, H. D., Ludvigsen, T. P., Skovgaard, T., Fels, J. J., Martinussen, T., Christiansen, L. B., Cirera, S. & Olsen, L. H., 2023, In: Scientific Reports. 13, 13 p., 6017.

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  2 Citations (Scopus)

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• Golgi fragmentation: One of the earliest organelle phenotypes in Alzheimer's disease neurons

  Haukedal, H., Corsi, G. I., Gadekar, V. P., Doncheva, N. T., Kedia, S., de Haan, N., Chandrasekaran, A., Jensen, P., Schiønning, P., Vallin, S., Marlet, F. R., Poon, A., Pires, C., Agha, F. K., Wandall, H. H., Cirera, S., Simonsen, A. H., Nielsen, T. T., Nielsen, J. E. & Hyttel, P. & 7 others, Muddashetty, R., Aldana, B. I., Gorodkin, J., Nair, D., Meyer, M., Larsen, M. R. & Freude, K., 2023, In: Frontiers in Neuroscience. 17, 17 p., 1120086.

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  15 Citations (Scopus)

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• MicroRNA profiling of cerebrospinal fluid from dogs with steroid responsive meningitis-arteritis and meningoencephalitis of unknown origin

  Mármol-Sánchez, E., Heidemann, P. L., Gredal, H. & Cirera, S., 2023, In: Frontiers in Veterinary Science. 10, 1144084.

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• 2022

  Analysis of merged transcriptomic and genomic datasets to identify genes and pathways underlying residual feed intake in growing pigs

  Ibragimov, E., Pedersen, A. Ø., Xiao, L., Cirera, S., Fredholm, M. & Karlskov-Mortensen, P., 2022, In: Scientific Reports. 12, 21946.

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  4 Citations (Scopus)

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• Are microRNAs possible biomarkers of bloodworm infection in horses?

  Nielsen, K. T., Ripley, N., Fromm, B., Cirera, S., Nielsen, M. K., Nielsen, L. N., Nejsum, P., Thamsborg, S. M. & Pihl, T., 2022.

  Research output: Contribution to conference › Conference abstract for conference › Research

• Association of fecal and serum microRNA profiles with gastrointestinal cancer and chronic inflammatory enteropathy in dogs

  Lyngby, J. G., Gòdia, M., Brogaard, L., Kristensen, A. T., Fredholm, M., Skancke, E., Morris, J., Dupont, N., Salavati Schmitz, S., Argyle, D., Sánchez, A., Bjørnvad, C. R., Cirera, S. & Nielsen, L. N., 2022, In: Journal of Veterinary Internal Medicine. 36, 6, p. 1989-2001

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  5 Citations (Scopus)

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• Functional and morphological renal changes in a Gottingen Minipig model of obesity-related and diabetic nephropathy

  Christoffersen, B. O., Kristensen, C. A., Lindgaard, R., Kirk, R. K., Viuff, B. M., Kvist, P. H., Pedersen, H. D., Ludvigsen, T. P., Skovgaard, T., Fels, J. J., Martinussen, T., Christiansen, L. B., Cirera, S. & Olsen, L. H., 2022, In: Diabetologia. 65, Suppl. 1, p. S397-S398 2 p.

  Research output: Contribution to journal › Conference abstract in journal › Research

• Marked gut microbiota dysbiosis and increased imidazole propionate are associated with a NASH Göttingen Minipig model

  Lützhøft, D. O., Sinioja, T., Christoffersen, B., Jakobsen, R. R., Geng, D., Ahmad, H. F. B., Straarup, E. M., Pedersen, K. M., Kot, W., Pedersen, H. D., Cirera, S., Hyötyläinen, T., Nielsen, D. S. & Hansen, A. K., 2022, In: BMC Microbiology. 22, 1, 287.

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  10 Citations (Scopus)

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• Modeling microRNA-driven post-transcriptional regulation using exon–intron split analysis in pigs

  Mármol-Sánchez, E., Cirera, S., Zingaretti, L. M., Jacobsen, M. J., Ramayo-Caldas, Y., Jørgensen, C. B., Fredholm, M., Cardoso, T. F., Quintanilla, R. & Amills, M., 2022, In: Animal Genetics. 53, 5, p. 613-626

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  3 Citations (Scopus)

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• Profiling microRNAs from the Equine Bloodworm (Strongylus vulgaris)

  Nielsen, K. T., Honoré Lytzhøft-Olsen, M. L., Fromm, B., Whitehead, S., Cirera, S., Nielsen, M. K., Nielsen, L. N., Nejsum, P., Thamsborg, S. M. & Pihl, T., 2022.

  Research output: Contribution to conference › Poster › Research

• The Molecular target of oxantel in whipworms

  Hansen, T. V. A., Klærke, D. A., Cirera, S., Callø, K., Courtot, E., Grencis, R., Issouf, M., Martin, R., Neveu, C. & Charvet, C., 2022.

  Research output: Contribution to conference › Conference abstract for conference › Research › peer-review

• Urinary microRNAome in healthy cats and cats with pyelonephritis or other urological conditions

  Godia, M., Brogaard, L., Marmol-Sanchez, E., Langhorn, R., Kieler, I. N., Reezigt, B. J., Nielsen, L. N., Jessen, L. R. & Cirera, S., 2022, In: PLoS ONE. 17, e0270067.

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  1 Citation (Scopus)

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• 2021

  Astrocytic reactivity triggered by defective autophagy and metabolic failure causes neurotoxicity in frontotemporal dementia type 3

  Chandrasekaran, A., Dittlau, K. S., Corsi, G. I., Haukedal, H., Doncheva, N. T., Ramakrishna, S., Ambardar, S., Salcedo, C., Schmidt, S. I., Zhang, Y., Cirera, S., Pihl, M., Schmid, B., Nielsen, T. T., Nielsen, J. E., Kolko, M., Kobolák, J., Dinnyés, A., Hyttel, P. & Palakodeti, D. & 5 others, Gorodkin, J., Muddashetty, R. S., Meyer, M., Aldana, B. I. & Freude, K. K., 2021, In: Stem Cell Reports. 16, 11, p. 2736-2751

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  25 Citations (Scopus)

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• Diet-Dependent Changes of the DNA Methylome Using a Göttingen Minipig Model for Obesity

  Feng, Y., Cirera, S., Taşöz, E., Liu, Y., Olsen, L. H., Christoffersen, B. Ø., Pedersen, H. D., Ludvigsen, T. P., Kirk, R. K., Schumacher-Petersen, C., Deng, Y., Fredholm, M. & Gao, F., 2021, In: Frontiers in Genetics. 12, 632859.

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  4 Citations (Scopus)

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• The narrow-spectrum anthelmintic oxantel is a potent agonist of a novel acetylcholine receptor subtype in whipworms

  Hansen, T. V. A., Cirera, S., Neveu, C., Courtot, E., Charvet, C. L., Calloe, K., Klaerke, D. A. & Martin, R. J., 2021, In: P L o S Pathogens. 17, 2, 26 p., e1008982.

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  9 Citations (Scopus)

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• Unraveling molecular mechanisms involved in the development of leptin resistance using the pig as a model

  Mármol-Sánchez, E., Artman, J. S., Fredholm, M. & Cirera, S., 2021, In: Animal Genetics. 52, 1, p. 55-65

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  2 Citations (Scopus)
• 2020

  Cloning and Expression of an Oxantel Sensitive Homomeric Nicotinic Acetylcholine Receptor of Trichuris, the Tsu-ACR-16-like receptor

  Hansen, T. V. A., Klærke, D. A., Cirera, S., Neveu, C., Callø, K. & Martin, R., 2020.

  Research output: Contribution to conference › Conference abstract for conference › Research › peer-review

• Differential microRNA expression-profiles in feces and serum of dogs with chronic inflammatory enteropathy and with gastrointestinal disease

  Lyngby, J. G., Godia, M., Kristensen, A. T., Fredholm, M., Skancke, E., Salvati, S., Morris, J. S., Argyle, D., Bjørnvad, C. R., Sánchez, A., Dupont, N. H., Cirera, S. & Nielsen, L. N., 2020.

  Research output: Contribution to conference › Conference abstract for conference › Research

• Discovery and annotation of novel microRNAs in the porcine genome by using a semi-supervised transductive learning approach

  Mármol-Sánchez, E., Cirera, S., Quintanilla, R., Pla, A. & Amills, M., 2020, In: Genomics. 112, 3, p. 2107-2118

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  6 Citations (Scopus)

• Fecal bile acid profiles in cats with chronic enteropathy, intestinal neoplasia, and in heathy control cats

  Lyngby, J. G., Hovland, A., Due, C., Cirera, S., Lidbury, J., Steiner, J., Sudolski, J., Bjørnvad, C. R. & Nielsen, L. N., 2020.

  Research output: Contribution to conference › Poster › Research

• Mutation in FTD3 CHMP2B causes impaired autography and distorted energy metabolism cumulating in reactive astrocyte phenotypes

  Chandrasekaran, A., Dittlau, K. S., Corsi, G., Haukedal, H., Doncheva, N. T., Ramakrishna, S., Ambardar, S., Salcedo, C., Schmidt, S. I., Cirera, S., Pihl, M., Schmid, B., Nielsen, T. T., Nielsen, J., Kolko, M., Kobolak, J., Dinnyes, A., Hyttel, P., Palakodeti, D. & Gorodkin, J. & 4 others, Muddashetty, R., Meyer, M., Aldana Garcia, B. I. & Freude, K., 2020.

  Research output: Contribution to conference › Conference abstract for conference › Research

• Mutations in FTD3 CHMP2B causes impaired autophagy and distorted energy metabolism cumulating in reactive astrocyte phenotypes

  Chandrasekaran, A., Dittlau, K. S., Corsi, G., Doncheva, N. T., Haukedal, H., Ramakrishna, S., Ambardar, S., Salcedo, C., Schmidt, S. I., Cirera, S., Pihl, M., Schmid, B., Nielsen, T. T., Nielsen, J., Kolko, M., Kobolak, J., Dinnyes, A., Hyttel, P., Palakodeti, D. & Gorodkin, J. & 4 others, Muddashetty, R., Meyer, M., Aldana Garcia, B. I. & Freude, K., 2020.

  Research output: Contribution to conference › Poster › Research

• NASH-inducing Diets in Göttingen Minipigs

  Pedersen, H. D., Galsgaard, E. D., Christoffersen, B., Cirera, S., Holst, D., Fredholm, M. & Latta, M., 2020, In: Journal of Clinical and Experimental Hepatology. 10, 3, p. 211-221

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  17 Citations (Scopus)

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• Stability and profiling of urinary microRNAs in healthy cats and cats with pyelonephritis or other urological conditions

  Jessen, L. R., Nielsen, L. N., Kieler, I. N., Langhorn, R., Reezigt, B. J. & Cirera, S., 2020, In: Journal of Veterinary Internal Medicine. 34, 1, p. 166-175

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  9 Citations (Scopus)

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• The expression signatures in liver and adipose tissue from obese Göttingen Minipigs reveal a predisposition for healthy fat accumulation

  Cirera, S., Taşöz, E., Juul Jacobsen, M., Schumacher-Petersen, C., Østergaard Christoffersen, B., Kaae Kirk, R., Pagh Ludvigsen, T., Hvid, H., Duelund Pedersen, H., Høier Olsen, L. & Fredholm, M., 2020, In: Nutrition and Diabetes. 10, 1, 12 p., 9.

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  10 Citations (Scopus)

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• 2019

  AU Content in the MicroRNA Sequence Influences its Stability after Heat Treatment

  López, A. G., Brogaard, L., Heegaard, P. M. H., Cirera, S. & Skovgaard, K., 2019, In: MicroRNA. 8, 3, p. 216-222 7 p.

  Research output: Contribution to journal › Journal article › Research › peer-review

• Challenges and standardization of microRNA profiling in serum and cerebrospinal fluid in dogs suffering from non-infectious inflammatory CNS disease

  Cirera, S., Andersen-Ranberg, E. U., Langkilde, S., Aaquist, M. & Gredal, H., 2019, In: Acta Veterinaria Scandinavica. 61, 1, 6 p., 57.

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  6 Citations (Scopus)

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• Epigenetic and Transcriptomic Characterization of Pure Adipocyte Fractions From Obese Pigs Identifies Candidate Pathways Controlling Metabolism

  Jacobsen, M. J., Havgaard, J. H., Anthon, C., Mentzel, C. M. J., Cirera, S., Krogh, P. M., Pundhir, S., Karlskov-Mortensen, P., Bruun, C. S., Lesnik, P., Guerin, M., Gorodkin, J., Jørgensen, C. B., Fredholm, M. & Barrès, R., 2019, In: Frontiers in Genetics. 10, 13 p., 1268.

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  8 Citations (Scopus)

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• Evaluation of fecal microRNA stability in healthy cats

  Lyngby, J. G., Kristensen, A. T., Fredholm, M., Nielsen, L. N. & Cirera, S., 2019, In: Veterinary Clinical Pathology. 48, 3, p. 455-460 6 p.

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  2 Citations (Scopus)

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• 2018

  A targeted genotyping approach enhances identification of variants in taste receptor and appetite/reward genes of potential functional importance for obesity-related porcine traits

  Cirera, S., Clop, A., Jacobsen, M. J., Guerin, M., Lesnik, P., Jørgensen, C. B., Fredholm, M. & Karlskov-Mortensen, P., Apr 2018, In: Animal Genetics. 49, 2, p. 110–118

  Research output: Contribution to journal › Journal article › Research › peer-review
  9 Citations (Scopus)

• Deregulation of obesity-relevant genes is associated with progression in BMI and the amount of adipose tissue in pigs

  Mentzel, C. M. J., Cardoso, T. F., Pipper, C. B., Jacobsen, M. J., Jørgensen, C. B., Cirera, S. & Fredholm, M., 1 Feb 2018, In: Molecular Genetics and Genomics. 293, 1, p. 129–136 8 p.

  Research output: Contribution to journal › Journal article › Research › peer-review
  4 Citations (Scopus)

• Evaluation of microRNA stability in feces from healthy dogs

  Cirera, S., Willumsen, L. M., Johansen, T. T. & Nielsen, L. N., Mar 2018, In: Veterinary Clinical Pathology. 47, 1, p. 115-121 7 p.

  Research output: Contribution to journal › Journal article › Research › peer-review
  5 Citations (Scopus)
• 2017

  Circulating let-7g is down-regulated in Bernese Mountain dogs with disseminated histiocytic sarcoma and carcinomas: a prospective study

  Børresen, B., Nielsen, L. N., Jessen, L. R., Kristensen, A. T., Fredholm, M. & Cirera Salicio, S., Jun 2017, In: Veterinary and Comparative Oncology. 15, 2, p. 525–533 10 p.

  Research output: Contribution to journal › Journal article › Research › peer-review
  9 Citations (Scopus)

• Detection and stability of microRNA in urine from healthy cats.

  Cirera, S., Nielsen, L. N., Langhorn, R. & Jessen, L. R., 2017.

  Research output: Contribution to conference › Poster › Research

• Evaluation of microRNA stability in plasma and serum from healthy dogs

  Enelund, L., Nielsen, L. N. & Cirera , S., 2017, In: MicroRNA. 6, 1, p. 42-52 11 p.

  Research output: Contribution to journal › Journal article › Research › peer-review
  21 Citations (Scopus)

• Fat and carbohydrate content in the diet induces drastic changes in gene expression in young Göttingen minipigs

  Mentzel, C. M. J., Figueiredo Cardoso, T., Haagensen, A. M. J., Sørensen, D. B., Fredholm, M. & Cirera Salicio, S., 2017, In: Mammalian Genome. 28, 5-6, p. 166-175 10 p.

  Research output: Contribution to journal › Journal article › Research › peer-review
  4 Citations (Scopus)

• FEELnc: A tool for long non-coding RNA annotation and its application to the dog transcriptome

  Wucher, V., Legeai, F., Hédan, B., Rizk, G., Lagoutte, L., Leeb, T., Jagannathan, V., Cadieu, E., David, A., Lohi, H., Cirera Salicio, S., Fredholm, M., Botherel, N., Leegwater, P. A. J., Le Béguec, C., Fieten, H., Johnson, J. J., Alföldi, J., André, C. & Lindblad-Toh, K. & 2 others, Hitte, C. & Derrien, T., 2017, In: Nucleic Acids Research. 45, 8, 12 p., e57.

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• Haplotypes on pig chromosome 3 distinguish metabolically healthy from unhealthy obese individuals

  Frederiksen, S. D., Karlskov-Mortensen, P., Pant, S. D., Guerin, M., Lesnik, P., Jørgensen, C. B., Cirera Salicio, S., Bruun, C. V. S., Mark, T. & Fredholm, M., 2017, In: PLoS ONE. 12, 6, 13 p., e0178828.

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  3 Citations (Scopus)

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• Systematic in vitro and in vivo characterization of Leukemia-inhibiting factor- and Fibroblast growth factor-derived porcine induced pluripotent stem cells

  Secher, J. O. B., Ceylan, A., Mazzoni, G., Mashayekhi-Nezamabadi, K., Li, T., Muenthaisong, S., Nielsen, T., Li, D., Li, S., Petkov, S. G., Cirera Salicio, S., Luo, Y., Thombs, L., Kadarmideen, H., Dinnyés, A., Bolund, L., Roelen, B. A., Schmidt, M., Callesen, H. & Hyttel, P. & 1 others, Freude, K., 2017, In: Molecular Reproduction and Development. 84, 3, p. 229-245

  Research output: Contribution to journal › Journal article › Research › peer-review
  15 Citations (Scopus)

• Transcriptional immune response in mesenteric lymph nodes in pigs with different levels of resistance to Ascaris suum

  Skallerup, P., Nejsum, P., Cirera, S., Skovgaard, K., Pipper, C. B., Fredholm, M., Jørgensen, C. B. & Thamsborg, S. M., Mar 2017, In: Acta Parasitologica. 62, 1, p. 141-153 13 p.

  Research output: Contribution to journal › Journal article › Research › peer-review
  4 Citations (Scopus)
• 2016

  Adipocyte gene expression and DNA methylation patterns differ significantly between lean and obese pigs

  Jacobsen, M. J., Havgaard, J. H., Mentzel, C. M. J., Sørensen, P. M., Pundhir, S., Anthon, C., Karlskov-Mortensen, P., Bruun, C. V. S., Cirera Salicio, S., Gorodkin, J., Jorgensen, C. B., Barrès, R. & Fredholm, M., 9 Nov 2016, In: Journal of Animal Science. 94, Supplement 4, p. 46-47 2 p., P2019.

  Research output: Contribution to journal › Conference abstract in journal › Research › peer-review

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