Personal profile
Short presentation
My current research elucidates the ecology and evolution of microorganisms in our fermented foods. I take an interdisciplinary approach that integrates natural history, hologenomics, and ethnographic knowledge to explore the origins and ecologies of fermentative bacteria. My broad aim is to clarify the interconnected aspects of nature and our ferments and then apply this understanding to inform responsible food systems.
Ongoing projects build on my past research on the microbial symbioses of insects. My PhD focused on the evolutionary relationships between microbes and their social insect hosts, like ants, termites, and bees. For example, I explore traditional fermentation practices that use insects or plants, and the microbes inherent to them. Specifically, I elucidate how these insect-microbe or plant-microbe consortia contribute to the ferments, and how this may have impacted the ecology and evolution of microbes in our modern foods.
Three pillars of my research:
- Elucidating the origins and ecologies of microbes in our fermented foods
- Studying the microbial symbioses of animals and plants involved in fermentation practices
- Using immersive storytelling to translate this knowledge to the public
My research involves collaboration with key team members including:
- Ana Cuesta-Maté – PhD Fellow – Center for Evolutionary Hologenomics, University of Copenhagen
- Rob Dunn, PhD – Senior Vice Provost of University Interdisciplinary Programs and Professor of Applied Ecology – North Carolina State University
- Sandra Breum Andersen – Associate Professor – Center for Evolutionary Hologenomics, University of Copenhagen
- Sevgi Mutlu Sirakova – PhD Fellow – Rachel Carson Center for Environment and Society, LMU Munich
- Christina Noer, PhD – Communications Consultant – Center for Evolutionary Hologenomics, University of Copenhagen
- Leonie Johanna Jahn, PhD – Co-principal Investigator – Novo Nordisk Center for Biosustainability, Denmark’s Technical University
Collaborations and top research areas from the last five years
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Making yogurt with the ant holobiont uncovers bacteria, acids, and enzymes for food fermentation
Sinotte, V. M., Ramos-Viana, V., Vásquez, D. P., Sirakova, S. M., Valerón, N. R., Cuesta-Maté, A., Parkins, S. K. T., Giecko, J., Velasco, E. M., Zilber, D., Munk, R., Andersen, S. B., Dunn, R. R. & Jahn, L. J., 2025, In: iScience. 28, 10, 21 p., 113595.Research output: Contribution to journal › Journal article › Research › peer-review
Open AccessFile2 Citations (Scopus)23 Downloads (Pure) -
Microbial Connections Podcast series
Noer, C. (Content producer), Gilbert, M. T. P. (Content producer), Limborg, M. T. (Participent/performer), Roager, H. M. (Participent/performer) & Sinotte, V. M. (Participent/performer), 2025Research output: Non-textual form › Sound/Visual production (digital) › Communication
Open Access -
Shaping the tripartite symbiosis: are termite microbiome functions directed by the environmentally acquired fungal cultivar?
Murphy, R. M., Sinotte, V. M., Cuesta-Maté, A., Renelies-Hamilton, J., Lenz-Strube, M. & Poulsen, M., 2024, In: Animal Microbiome. 6, 17 p., 44.Research output: Contribution to journal › Journal article › Research › peer-review
Open AccessFile1 Citation (Scopus)21 Downloads (Pure) -
Impact of Microbial Symbionts on Fungus-Farming Termites and Their Derived Ecosystem Functions
Murphy, R., Sinotte, V. M., Schmidt, S., Li, G., Hamilton Renalias, J., Koné, N. A. & Poulsen, M., 2023, Assessing the Microbiological Health of Ecosystems. Hurst, C. J. (ed.). Wiley, p. 185-203Research output: Chapter in Book/Report/Conference proceeding › Book chapter › Research › peer-review
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Selective enrichment of founding reproductive microbiomes allows extensive vertical transmission in a fungus-farming termite
Sinotte, V. M., Renelies-Hamilton, J., Andreu-Sánchez, S., Vasseur-Cognet, M. & Poulsen, M., 2023, In: Proceedings of the Royal Society B: Biological Sciences. 290, 2009, 12 p., 20231559.Research output: Contribution to journal › Journal article › Research › peer-review
Open AccessFile8 Citations (Scopus)54 Downloads (Pure) -
Extensive inheritance of gut microbial communities in a superorganismal termite
Sinotte, V., Renelies-Hamilton, J., Andreu-Sánchez, S., Vasseur-Cognet, M. & Poulsen, M., 30 Aug 2022, Research Square-Preprint, 34 p.Research output: Working paper › Preprint
File90 Downloads (Pure) -
Female-biased sex allocation and lack of inbreeding avoidance in Cubitermes termites
Sinotte, V. M., Conlon, B. H., Seibel, E., Schwitalla, J. W., de Beer, Z. W., Poulsen, M. & Bos, N., 2021, In: Ecology and Evolution. 11, 10, p. 5598-5605 8 p.Research output: Contribution to journal › Journal article › Research › peer-review
Open AccessFile8 Citations (Scopus)80 Downloads (Pure) -
Resistance and Vulnerability of Honeybee (Apis mellifera) Gut Bacteria to Commonly Used Pesticides
Cuesta-Maté, A., Renelies-Hamilton, J., Kryger, P., Jensen, A. B., Sinotte, V. M. & Poulsen, M., 2021, In: Frontiers in Microbiology. 12, 16 p., 717990.Research output: Contribution to journal › Journal article › Research › peer-review
Open AccessFile48 Citations (Scopus)67 Downloads (Pure)