TY - JOUR
T1 - Human skeletal muscle fiber heterogeneity beyond myosin heavy chains
AU - Moreno-Justicia, Roger
AU - Van der Stede, Thibaux
AU - Stocks, Ben
AU - Laitila, Jenni
AU - Seaborne, Robert A.
AU - Van de Loock, Alexia
AU - Lievens, Eline
AU - Samodova, Diana
AU - Marín-Arraiza, Leyre
AU - Dmytriyeva, Oksana
AU - Browaeys, Robin
AU - Van Vossel, Kim
AU - Moesgaard, Lukas
AU - Yigit, Nurten
AU - Anckaert, Jasper
AU - Weyns, Anneleen
AU - Van Thienen, Ruud
AU - Sahl, Ronni E.
AU - Zanoteli, Edmar
AU - Lawlor, Michael W.
AU - Wierer, Michael
AU - Mestdagh, Pieter
AU - Vandesompele, Jo
AU - Ochala, Julien
AU - Hostrup, Morten
AU - Derave, Wim
AU - Deshmukh, Atul S.
N1 - Publisher Copyright:
© The Author(s) 2025.
PY - 2025
Y1 - 2025
N2 - Skeletal muscle is a heterogenous tissue comprised primarily of myofibers, commonly classified into three fiber types in humans: one “slow” (type 1) and two “fast” (type 2A and type 2X). However, heterogeneity between and within traditional fiber types remains underexplored. We applied transcriptomic and proteomic workflows to 1050 and 1038 single myofibers from human vastus lateralis, respectively. Proteomics was conducted in males, while transcriptomics included ten males and two females. We identify metabolic, ribosomal, and cell junction proteins, in addition to myosin heavy chain isoforms, as sources of multi-dimensional variation between myofibers. Furthermore, whilst slow and fast fiber clusters are identified, our data suggests that type 2X fibers are not phenotypically distinct to other fast fibers. Moreover, myosin heavy chain-based classifications do not adequately describe the phenotype of myofibers in nemaline myopathy. Overall, our data indicates that myofiber heterogeneity is multi-dimensional with sources of variation beyond myosin heavy chain isoforms.
AB - Skeletal muscle is a heterogenous tissue comprised primarily of myofibers, commonly classified into three fiber types in humans: one “slow” (type 1) and two “fast” (type 2A and type 2X). However, heterogeneity between and within traditional fiber types remains underexplored. We applied transcriptomic and proteomic workflows to 1050 and 1038 single myofibers from human vastus lateralis, respectively. Proteomics was conducted in males, while transcriptomics included ten males and two females. We identify metabolic, ribosomal, and cell junction proteins, in addition to myosin heavy chain isoforms, as sources of multi-dimensional variation between myofibers. Furthermore, whilst slow and fast fiber clusters are identified, our data suggests that type 2X fibers are not phenotypically distinct to other fast fibers. Moreover, myosin heavy chain-based classifications do not adequately describe the phenotype of myofibers in nemaline myopathy. Overall, our data indicates that myofiber heterogeneity is multi-dimensional with sources of variation beyond myosin heavy chain isoforms.
U2 - 10.1038/s41467-025-56896-6
DO - 10.1038/s41467-025-56896-6
M3 - Journal article
C2 - 39971958
AN - SCOPUS:85218473007
SN - 2041-1723
VL - 16
JO - Nature Communications
JF - Nature Communications
IS - 1
M1 - 1764
ER -