TY - JOUR
T1 - Mg2+-dependent conformational equilibria in CorA and an integrated view on transport regulation
AU - Johansen, Nicolai Tidemand
AU - Bonaccorsi, Marta
AU - Bengtsen, Tone
AU - Larsen, Andreas Haahr
AU - Tidemand, Frederik Grønbæk
AU - Pedersen, Martin Cramer
AU - Huda, Pie
AU - Berndtsson, Jens
AU - Darwish, Tamim
AU - Yepuri, Nageshewar Rao
AU - Martel, Anne
AU - Pomorski, Thomas Günther
AU - Bertarello, Andrea
AU - Sansom, Mark
AU - Rapp, Mikaela
AU - Crehuet, Ramon
AU - Schubeis, Tobias
AU - Lindorff-Larsen, Kresten
AU - Pintacuda, Guido
AU - Arleth, Lise
N1 - Publisher Copyright:
© 2022, Johansen et al.
PY - 2022
Y1 - 2022
N2 - The CorA family of proteins regulates the homeostasis of divalent metal ions in many bacteria, archaea, and eukaryotic mitochondria, making it an important target in the investigation of the mechanisms of transport and its functional regulation. Although numerous structures of open and closed channels are now available for the CorA family, the mechanism of the transport regulation remains elusive. Here, we investigated the conformational distribution and associated dynamic behaviour of the pentameric Mg2+ channel CorA at room temperature using small-angle neutron scattering (SANS) in combination with molecular dynamics (MD) simulations and solid-state nuclear magnetic resonance spectroscopy (NMR). We find that neither the Mg2+-bound closed structure nor the Mg2+-free open forms are sufficient to explain the average conformation of CorA. Our data support the presence of conformational equilibria between multiple states, and we further find a variation in the behaviour of the backbone dynamics with and without Mg2+. We propose that CorA must be in a dynamic equilibrium between different non-conducting states, both symmetric and asymmetric, regardless of bound Mg2+ but that conducting states become more populated in Mg2+-free conditions. These properties are regulated by backbone dynamics and are key to understanding the functional regulation of CorA.
AB - The CorA family of proteins regulates the homeostasis of divalent metal ions in many bacteria, archaea, and eukaryotic mitochondria, making it an important target in the investigation of the mechanisms of transport and its functional regulation. Although numerous structures of open and closed channels are now available for the CorA family, the mechanism of the transport regulation remains elusive. Here, we investigated the conformational distribution and associated dynamic behaviour of the pentameric Mg2+ channel CorA at room temperature using small-angle neutron scattering (SANS) in combination with molecular dynamics (MD) simulations and solid-state nuclear magnetic resonance spectroscopy (NMR). We find that neither the Mg2+-bound closed structure nor the Mg2+-free open forms are sufficient to explain the average conformation of CorA. Our data support the presence of conformational equilibria between multiple states, and we further find a variation in the behaviour of the backbone dynamics with and without Mg2+. We propose that CorA must be in a dynamic equilibrium between different non-conducting states, both symmetric and asymmetric, regardless of bound Mg2+ but that conducting states become more populated in Mg2+-free conditions. These properties are regulated by backbone dynamics and are key to understanding the functional regulation of CorA.
KW - cora mg2+ channel
KW - E. coli
KW - metadynamics simulation
KW - molecular biophysics
KW - small-angle neutron scattering
KW - solid-state nuclear magnetic resonance
KW - structural biology
U2 - 10.7554/eLife.71887
DO - 10.7554/eLife.71887
M3 - Journal article
C2 - 35129435
AN - SCOPUS:85125020573
VL - 11
JO - eLife
JF - eLife
SN - 2050-084X
ER -